Helicobacter bizzozeronii: HBZC1_09190
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Entry
HBZC1_09190 CDS
T01540
Name
(GenBank) GTPase and tRNA-U34 5-formylation enzyme TrmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
hbi
Helicobacter bizzozeronii
Brite
KEGG Orthology (KO) [BR:
hbi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hbi03016
]
HBZC1_09190
Transfer RNA biogenesis [BR:
hbi03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
HBZC1_09190
Prokaryotic type
Methyltransferases
HBZC1_09190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
MMR_HSR1
Dynamin_N
FeoB_N
AIG1
RsgA_GTPase
TrmE_N
AAA_15
Roc
AAA_24
Ras
THF_DHG_CYH_C
Motif
Other DBs
NCBI-ProteinID:
CCB79905
UniProt:
F8KSX1
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All DBs
Position
869180..870232
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AA seq
350 aa
AA seq
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MAQAGEFSKRAFLNGRLDFSQVQALAKLIEAKSEKGAKMMAKQLKGALKDFVQSTRTALL
ELLASSEVLIDYAEEDLPLDLGTTMQAKLHATLEKLQGILEFSKSQSARLEGYKLCIVGK
PNVGKSSFLNALLLEERALVSPIAGTTRDTIEEIISLYGSCLKIIDTAGIRHASDAIESL
GIAKSLKSMQESDIILALFDLSAPLDSQDQHILELLGAQKDKIIGVIFNKDDCPQELDTQ
ALLNALPHSLPPLKLNTKQPCLPLLKDLLKPLFEEDSPNESVILASLTQQQALEQTITHL
TSAAHTLASLELELFSYHLKDALESLAQITQPYQVEELLDTLFSRFCLGK
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
ttggcacaagcaggagagtttagcaaaagggcgtttttaaatgggcggctagatttttcc
caagtgcaggcattagcaaaactcatagaagccaagagcgaaaagggtgccaaaatgatg
gctaaacagctcaaaggcgcgttaaaagacttcgtgcaaagcacacgcaccgccctttta
gaattgctagccagtagcgaggtgttgatcgattatgctgaggaagatttgcccctagat
ttgggcaccaccatgcaggcaaaattacacgccactttagagaaattacaaggcatttta
gagttttccaaatcccaaagcgcgcgcttggagggctataaactctgcattgtgggcaag
cccaatgtgggcaaaagctcatttttaaacgccctactcttagaggaacgcgccttagtg
agcccaatagcgggcacgactagggacaccattgaggagatcattagcctttatgggagt
tgtttaaaaatcatcgacacagccgggattaggcatgccagcgatgcaatcgagtcttta
gggattgccaagagtttaaagagcatgcaagagagcgatattatcttagccctttttgat
ctctctgctcccctagatagtcaggatcagcatatcttagagctcttaggggcacaaaag
gataaaatcataggcgtgatctttaataaagatgattgcccccaagagctagacacacaa
gcccttttaaatgctctaccccacagcctaccacccctcaaactcaataccaagcaaccc
tgtttgcccttactaaaggacttgctaaagcccctctttgaagaggatagccccaatgaa
agcgtgatcttggctagcttgacccagcaacaagccctcgagcagaccatcacgcattta
acaagtgcggcccacacgctagcaagccttgagctagaactcttttcctaccacctcaaa
gatgccctagagagtttggctcagatcacacagccctaccaagtggaggagttgcttgac
accctcttttctcgtttttgtttgggcaaatga
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