Helicobacter bizzozeronii: HBZC1_15380
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Entry
HBZC1_15380 CDS
T01540
Name
(GenBank) ribosomal protein S12p Asp88 (E. coli) methylthiotransferase
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
hbi
Helicobacter bizzozeronii
Brite
KEGG Orthology (KO) [BR:
hbi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hbi03009
]
HBZC1_15380
Enzymes [BR:
hbi01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
HBZC1_15380
Ribosome biogenesis [BR:
hbi03009
]
Prokaryotic type
ribosomal protein modification factors
HBZC1_15380
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
CLP1_P
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
CCB80524
UniProt:
F8KP19
LinkDB
All DBs
Position
complement(1426926..1428227)
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AA seq
433 aa
AA seq
DB search
MRPKLYLVSLGCSKNLVDSEVMLGKLSAYELTQDCSQADVIIVNTCGFIHSAKQESVQVL
LEAIKARKEGALVVASGCLSQRYKEELQAELPEIDIFTGVGDYDRIDELIATKKSAFSAP
IFLANASHQRTIIGSKVHAYVKLSEGCNQNCSFCAIPSFKGRLQSKSIDQILKEVENLAK
QGFSDISFIAQDSSSYLSDQGVKEGLVGLIEAIDQQQALKSARIFYLYPTSTTPKLIDTI
ANSPIFVNYFDMPIQHISDHMLKTMRRNSNTQTHIQLLERMKALPDSFLRTTLLLGHPGE
SEEDIAILQEFLEGFSFDRINLFAFSPEENTRAHKMERVPESVINQRLNRINACVQKQVQ
ASMQNLLNKPIDVIVEGLSEDGLFLKARDKRWGLEIDGEILINESLVENTTPGHYKAICS
AYEEGMLVGKIIA
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
gtgcgccctaaactttatttggtgtctttgggctgttctaaaaacttggtggatagcgag
gtgatgttaggcaaactctctgcctatgagctcacccaagattgcagccaagctgatgtt
atcattgtgaatacctgtgggtttatccactcagccaagcaagagagcgtgcaggtcttg
ctagaggcgatcaaggcacgcaaagagggcgcgctggtggtggctagcgggtgtttgagc
caacgctacaaagaggagctacaagccgagttgcctgagatcgacatttttacgggtgtg
ggggattatgatcgcatcgatgaactcatcgccaccaaaaaaagcgcattttcagccccc
atctttttagccaacgccagccaccaacgcaccatcatcggctctaaggtgcatgcctat
gtgaaactctctgaggggtgcaaccaaaattgcagtttttgtgcgatccctagctttaag
gggcgtttgcaaagcaagagcatcgatcagattttaaaagaggtggaaaatctagccaag
cagggctttagcgatattagtttcatcgcccaagattctagctcttatctaagcgatcaa
ggcgtgaaagagggcttagtgggactcattgaggcgatcgatcaacaacaagccctcaaa
agcgcacgcattttctacctctaccccacttccaccacgcccaaactcatcgacacgatc
gctaactcgcctatttttgtcaattattttgatatgcccatccagcacatctcagatcac
atgctcaaaaccatgcgccgcaactccaacacacaaacccatatccagcttttagagcgc
atgaaagccctaccagatagttttttacgcacgactttactactggggcaccccggggaa
agcgaggaggacatagcgatcttgcaagagtttttagagggttttagctttgatcgcatc
aatctctttgcctttagccctgaggaaaacacgcgtgcgcacaaaatggagcgtgtgcct
gagagtgtgatcaaccaacgcctaaatagaatcaatgcttgcgtgcaaaaacaagtgcaa
gcctccatgcaaaatctcttaaacaagcctattgatgtgattgtagagggcttaagcgaa
gatggactttttttaaaagcacgggacaaacgctggggattagaaattgatggggaaatc
ctcattaatgagagtttggtagaaaatacaactcccgggcactacaaggcgatctgttct
gcctacgaggagggcatgttggtgggcaagatcattgcttga
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