Helicobacter bizzozeronii: HBZC1_17020
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Entry
HBZC1_17020 CDS
T01540
Name
(GenBank) tRNA pseudouridine 13 synthase
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
hbi
Helicobacter bizzozeronii
Brite
KEGG Orthology (KO) [BR:
hbi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hbi03016
]
HBZC1_17020
Enzymes [BR:
hbi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
HBZC1_17020
Transfer RNA biogenesis [BR:
hbi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HBZC1_17020
Prokaryotic type
HBZC1_17020
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
CCB80688
UniProt:
F8KPG4
LinkDB
All DBs
Position
complement(1577594..1578715)
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AA seq
373 aa
AA seq
DB search
MNASRFFASGHAPITFSFHKCPRDFVVQEEPLYAFYGHGDHLIVQVRKKNKSTWEMLSLL
SQVLGCDVSIFGYAGLKDKHTMALQYVSMPKSYETLLDQHTPILAEQGITILRSTTHPHK
LNLGHLKGNHFLVRLKKLDPINAQRISQVLLFLQAYGFPNYLGVQCSESLEEGFKHGNAS
SKKIDRVLLSNQQSCLFNQWLGARMHLNFLVQVLSPREIAREFMGLSVKQAQILKAQQHY
FKLLNGDVLCHYPSFRRCFYHYDQDLGHDVERLYTHRLAPTGLLPGHKVLLAKDFAGSFE
EPYSNLIDIQGDRRYALVFPTDVSFNYNTQKAQGELRFFLPKGAYATTFLEELAGKELFG
LETFGSPLSSFLI
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcgtctagattttttgccagtggccatgcccccatcacattttctttccacaaa
tgccccagagactttgtggtgcaagaagaacccttgtatgctttctatgggcatggggat
catctcattgtgcaggtgcgtaaaaagaacaagagcacttgggagatgctttcgctatta
tcgcaagtattgggttgtgatgtatccatttttggttatgctggactcaaggacaaacac
acgatggcgttgcaatatgtgtccatgcccaaaagctacgaaactctattggaccagcac
acccccatacttgccgagcaaggaatcacgattctaaggagcaccacgcacccccataaa
ctgaatctagggcatctcaagggcaatcactttttagtgcgccttaaaaaactcgatccg
atcaatgcccaaagaatcagtcaggttttgctttttttacaagcctatggtttccccaac
taccttggggtgcaatgctctgagagcttggaagaaggttttaaacacggcaatgccagt
agtaaaaaaatcgatcgggtcttgctttctaaccaacaaagttgtttgtttaaccagtgg
ttgggtgcgcgcatgcacttaaatttccttgtgcaggttcttagtcctagagaaatcgcc
cgtgagttcatggggcttagtgtgaaacaagctcaaatcctcaaagcccaacaacattac
ttcaaacttttaaatggtgatgtgctgtgccattacccctcctttaggcggtgtttttac
cattacgatcaggatttagggcatgatgtcgaacggctatacacccatagactagccccc
acagggttattgcccggacataaagtattgctagctaaagattttgctggctcttttgaa
gagccctatagcaacttaattgatatccaaggcgatcgccgttacgccctagttttcccc
acagatgtttcttttaactacaacacccaaaaagcccaaggcgagttgcgctttttcctg
cccaaaggggcttatgcgacaacatttttagaagaacttgcgggcaaggagctctttggt
cttgaaacctttggatcgcctctttcatcttttttgatataa
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