Helicobacter bizzozeronii: HBZC1_18500
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Entry
HBZC1_18500 CDS
T01540
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
hbi
Helicobacter bizzozeronii
Pathway
hbi03030
DNA replication
hbi03430
Mismatch repair
hbi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hbi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HBZC1_18500
03430 Mismatch repair
HBZC1_18500
03440 Homologous recombination
HBZC1_18500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hbi03032
]
HBZC1_18500
03400 DNA repair and recombination proteins [BR:
hbi03400
]
HBZC1_18500
Enzymes [BR:
hbi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HBZC1_18500
DNA replication proteins [BR:
hbi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HBZC1_18500
DNA repair and recombination proteins [BR:
hbi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HBZC1_18500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HHH_3
Motif
Other DBs
NCBI-ProteinID:
CCB80836
UniProt:
F8KPU2
LinkDB
All DBs
Position
1710716..1714315
Genome browser
AA seq
1199 aa
AA seq
DB search
MQQFTHLHLHTEYSLLDGANKIKTLAQKIKELGMESVSMSDHGNMFGAIDFYTCMKKEGI
KPIIGIETYLHNAQNLGDKQSRQRFHLCLYAKDLEGYHNLMYLSSQAFLEGFYYYPRINK
KLLRERSKGIICSSACLQGEINWHLNTNNPKNKQYGAKGYDGAKRVAEEYQEIFGDDFYM
EIMRHGIADQLFIDEQLIRLSLETGIKLIATNDTHYTNKEDASAQEVAMCVAMGKTLNDE
NRLKHSVHEFYIKTPEQMAKLFADIPEALQNTQEIAHKCHLELDLKNDANPPTPPRFKFT
QQYAQEEGLDLEDDGAYFAYKSREGLKKRLERVDPSQHALYQERLEYEIKIINEMKFPGY
MLIVWDFIRHARENGIPVGPGRGSAAGSLVAFCLQITDIDPIKYDLLFERFLNPDRVSMP
DIDTDFCQKRRGEMLDYMINKYGKYNVAQVITFNKMLAKGVIRDVARVLDMPYKQADEMA
KLIPNKLGITLQEAFDLEPKIKTLIESDKLAKEVWDFSLRLENLNRSAGKHAAALVVDSE
RELWYKTPLYTSERTGGIVTQYSMKYLEAIDLIKFDFLGLKTLSVIHDTLKIIEKYSHQK
IDLLGVDMNDPQVYATIQEGNTIGIFQIESGMFQTLNKRLRPSSFEDIVAIIALGRPGPM
ESGMVDDFVNRKHGHEPITYMFEALEPILRPTYGTIIYQEQVMQIVQSIAGFSLGEADLI
RRAMGKKDASIMAANRAKFVEGAQKKGYEVQKAGELFDLIVKFAGYGFNKSHSVAYAMLT
FQTAYLKTHYKHEFMAAMLSSECRHIEEVARYVEEANSMGIAIERPHVNHSDVSFKVEQR
KKDKIIIFGLEAIKGAGEGPLGALVEMREKHGVFKNLEDLISKLDFSKFSKRILEPLIKS
GSLDGLGYNRHTMLKNLDAICDEGRRKDKTNAQMRAGLFSQQETHEKANLDLKFYEEYDS
NTLLDFEYECMGLYFSGHPLDEFKAPIKALKNVAKSVDIPRMEIGSQAVFVGKILEIKRK
LSKKSQKPYGYVSIVDLSGRFELMLFEKQLNALDTLNIEQPLAFKCKIEEQEEVARLRLL
EMDTLENIKGVKIPKARYKNNPEEAQMSQPLDIAKDFQTDSSCLLTCQDEQHIPLSIVLD
TSVSLELFAKLKDAAQSHKGERALSLIFHDQDKRFKFNTALKVNSAIKQSFQAYEWLDI
NT seq
3600 nt
NT seq
+upstream
nt +downstream
nt
atgcaacaattcacccatttacacttgcacaccgagtattcgcttttagatggggctaat
aagatcaagaccctagcccaaaagatcaaagagttgggcatggagagtgtgagcatgagc
gatcatgggaacatgtttggcgcgattgacttttatacatgcatgaaaaaagagggaatc
aagcccattattgggattgaaacctacttgcacaatgcccaaaacttgggcgacaaacaa
tcaaggcaacgcttccatctttgcttgtatgccaaagatttagagggttatcacaatttg
atgtatttgagctcacaagcttttttagaggggttttattattacccccgtatcaataaa
aagctcttaagggagcgatctaaggggatcatctgttcgagtgcgtgtctgcaaggggag
atcaactggcatttaaacaccaataaccctaaaaataaacaatatggggctaagggctat
gatggggctaagagggtggcagaggaataccaagagatttttggggatgatttttacatg
gagatcatgcgccatggcattgccgaccagctttttattgatgagcaactcattagatta
tccttagaaacgggcattaagctcattgccactaatgacacccactacaccaacaaagag
gatgccagtgcgcaagaggtcgccatgtgcgtggcgatgggtaagaccttaaatgatgaa
aaccgcttaaaacactccgtgcatgagttttatatcaaaacccctgagcagatggctaaa
ctctttgcagacatccctgaagccctgcaaaacacccaagagatcgcccataagtgccat
ttggagttggatttaaaaaatgatgccaacccgcccacacccccgcgttttaaattcacc
cagcaatacgcccaagaggaggggctggacttagaggacgacggggcttactttgcctat
aaatccagagaggggcttaaaaagcgtttggaacgggttgatcctagccaacatgccctt
tatcaagagcggctagaatacgaaatcaagatcatcaatgagatgaaattccccggctac
atgctgattgtgtgggattttatcaggcatgcgcgtgaaaatgggattcctgtaggtccg
gggcggggcagtgcagcaggcagtttggtcgccttttgtttgcaaatcactgatattgac
cccatcaaatacgatctgttgtttgaacgattcttaaatcccgatcgcgtgtccatgcct
gatattgatacggatttttgccaaaaacggcggggcgagatgttggactatatgattaac
aagtatggcaaatacaatgtcgcccaagtgatcaccttcaataaaatgctggctaaaggg
gtgatccgcgatgtggcgcgggtgctagacatgccctataaacaagccgatgagatggca
aaactcatccccaataaattagggatcactttgcaagaagcctttgatctagagcccaag
atcaaaacactcatagagagcgataaacttgccaaagaggtttgggatttttccttgcgt
ttggaaaatctcaaccgctcggcaggcaaacatgcggctgctttggtggtggatagtgag
cgcgagctgtggtataaaaccccgctttataccagtgagcgcacggggggcattgttacc
cagtattccatgaaatatttagaagccattgacttgattaagtttgactttttggggctt
aagactttgagcgtgatccatgacaccctaaagatcattgaaaaatacagccaccaaaaa
atcgatctcttaggcgtggatatgaacgatccacaggtttatgccacgatccaagagggc
aacacgattgggatattccaaatcgagtccgggatgttccaaaccctaaacaaacggcta
cgcccttccagctttgaggatattgtcgctatcatcgctttggggcgccccggacctatg
gagtcgggcatggtcgatgattttgtcaaccgcaaacatgggcatgaacccatcacctat
atgtttgaagccctagagcccattttacgccccacttatgggaccatcatctaccaagaa
caggtgatgcaaattgtgcagagcattgcgggcttttctttgggcgaagcggatttgatc
aggcgtgcgatgggtaaaaaagatgccagcatcatggcggctaatcgggctaagtttgtg
gagggcgcgcaaaaaaagggctatgaggtgcaaaaggcgggcgaactctttgatctcatt
gtcaaatttgccggctatggctttaataaatcccactcggttgcctatgccatgctcact
ttccaaacggcttatttgaaaacccactacaagcacgagttcatggcggccatgctcagt
agtgagtgccgccacattgaggaagtggcgcgttatgtggaggaagctaattctatgggg
attgccattgaacgcccccatgtcaatcattccgatgtgagttttaaggtcgaacaacgc
aaaaaagataagatcatcatctttgggttagaggcgatcaagggagcgggcgagggaccg
ctaggggctttagtggaaatgcgtgaaaaacacggagtctttaaaaatttggaggatttg
atcagcaagttagatttttccaaatttagcaaacgcattttagaacccttgattaaatcc
ggaagtttggatggactaggctataaccgccacaccatgctaaaaaatttagatgcgatt
tgcgatgaggggcgcagaaaagacaaaaccaatgcccaaatgcgcgcggggctattctcc
cagcaagaaacgcatgaaaaagcaaacttggatttaaaattctatgaggaatatgacagc
aacacgcttttagattttgaatacgagtgcatggggctttatttttccggacacccttta
gatgagtttaaagcccccatcaaggcgttaaaaaatgtggctaagagcgtggatattccc
cgcatggagattggctcacaagcggtgtttgtgggtaagattttagagatcaaacgcaaa
ttgagcaaaaagagccaaaaaccctatgggtatgtgtcgattgtggatttatcagggcgt
tttgagttgatgttgtttgaaaagcaactcaacgccctagacacgctcaatatagaacag
cccctagccttcaaatgcaagatcgaggaacaagaggaggtcgcgcgcttacggctctta
gagatggataccctagagaatatcaagggtgtcaaaatccccaaagcacgctataaaaat
aacccagaggaggcgcaaatgtcccaacccttagacattgccaaagattttcaaaccgat
tctagttgcttgctcacctgccaagatgaacaacacatccccctatccatcgtgctggat
accagcgtgtctttagaactctttgcaaagctcaaagatgccgcccaaagccacaagggc
gagcgtgccctatcgttgatctttcacgatcaggacaagcgctttaaattcaacaccgcc
cttaaagtcaatagcgcgatcaagcagagtttccaagcctatgaatggttagacatctaa
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