Helicobacter bizzozeronii: HBZC1_18700
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Entry
HBZC1_18700 CDS
T01540
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
hbi
Helicobacter bizzozeronii
Pathway
hbi00300
Lysine biosynthesis
hbi00470
D-Amino acid metabolism
hbi01100
Metabolic pathways
hbi01110
Biosynthesis of secondary metabolites
hbi01120
Microbial metabolism in diverse environments
hbi01230
Biosynthesis of amino acids
Module
hbi_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
hbi00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HBZC1_18700
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HBZC1_18700
Enzymes [BR:
hbi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
HBZC1_18700
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Ortholog
Paralog
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
CM_2
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
CCB80856
UniProt:
F8KPW2
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All DBs
Position
complement(1733138..1735084)
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AA seq
648 aa
AA seq
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MLELAQIQEIATQHATPFYLYDLDRIESRFADFKEVFKGKKSLICYALKANSNLALLQHL
AKLGCGADCVSIYEVRKALLAGIKPYHIIFSGVGKLEHEISLALTSKILFLNVESFAELH
LIERIARNLGLQARISVRVNPNIDALTHPYISTGLWENKFGVEEKEAVQMFMFAKQSAFL
EPIAMQFHIGSQLTDLAPLSEACTKMGALARFLVASGVELKFFDVGGGLGIDYSQEQNQS
LIDLNAYASAIFQALKELDLTIICEPGRKIVGDSGVLVSQVQYTKHNERKHFAIIDAGMN
DFLRPALYQATHPIYTTSDPTNPKQTYDLVGPICESADCFARGVQLPTLKRGDLVILDKV
GAYGASMASHYNSRPKILELGLSQGTLKVLKPKEKLAHMISDELGCLGVENLGQSRAQID
HLDQQISTLLQQRLQIARQIAQHKQSLGLKSYYPVREAQIFKGVGKGLESIFTEILGVSR
SLLGPEKIGFCGLEGDIRRAFGQSASLQELDPPALIQALQEGGIDFGAFLVQECLKDMVD
VMLAGKIKAIHSLEFAKRWYLVVARADFALHAEDILEKKSALYCLHATLEFLTQSLKPAK
LCHAHPLGTHLLLEVAHTSAPQSILDALTFCQPTNLGTYASVEPRFGF
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgctggagctagcccaaatccaagagatcgccacccaacatgccacgcccttttatctc
tacgatttggatcgcatagaaagtaggtttgccgattttaaagaagttttcaagggcaaa
aaatccttaatttgctatgcgctcaaggctaattctaatttagccctcttgcaacacttg
gcaaaattgggctgtggggctgattgtgtttccatctatgaagtgcgtaaagccctttta
gctgggatcaagccctaccacatcatttttagcggggtgggtaaattagaacatgaaatc
agccttgccctcactagcaagattttatttttaaatgtggagtcctttgcagaattgcat
ttgatcgagcgtatcgcccgcaatttggggctacaagcccgtatctctgtgcgtgtcaat
cctaatattgacgcactcacccacccctatatctctactggactttgggaaaataaattc
ggggtggaggaaaaagaagcggtgcagatgttcatgtttgccaagcagtccgctttttta
gagccaattgcgatgcaatttcatattggctcccagctcaccgacctagcccccttaagc
gaggcttgcaccaagatgggggcgttggcgcgttttttggtggctagtggggtggagctc
aaattttttgatgtgggcggggggcttgggattgattatagccaagagcaaaatcaaagc
ttaatcgatttgaatgcctatgctagtgccattttccaagccctcaaggaattagattta
accatcatctgtgagcccgggcgtaaaattgtcggggatagcggggtgctggttagccaa
gtccaatacaccaagcacaatgaacgcaagcattttgcgatcatcgatgcggggatgaat
gattttttacgccctgccctctaccaagccacccaccccatctacaccaccagcgatcca
actaaccccaaacaaacttacgatctagtgggacccatttgtgaaagtgcggattgcttt
gctaggggggtgcaattacccacgcttaaacggggagacttggtgatcctagataaagtg
ggggcttatggggcgagcatggctagccattataatagccgccctaaaatcctagagtta
ggcttaagccaaggcacgcttaaagtgcttaaacccaaagaaaaattagcccacatgatc
agcgatgagctgggttgtttgggcgtggagaatttagggcaaagccgcgctcaaatcgat
catttggatcaacaaattagcacgctgttgcaacaacgcttgcaaatcgcgcgccaaatc
gcccagcacaagcaaagcttggggctcaagagctactaccccgtgcgtgaagcccagatt
tttaagggagtgggtaagggcttggagagcatttttacggaaatcttaggggtttcacgc
agtttgctaggtccagagaaaatcgggttttgtggcttggagggggatatacgccgtgcc
tttgggcaaagtgcatctttgcaggaattagaccccccagctttgatccaagctctgcaa
gaaggggggatagactttggggcgttcttagtgcaagagtgcttaaaagacatggtggat
gtcatgcttgctggtaaaatcaaggcgatccactctttggaatttgctaagcgttggtat
ttggtggtggctagggcggattttgccctgcatgcggaggacatcttagagaaaaaaagt
gcgctgtattgcttgcatgcaaccctagaatttttaacccaaagcctcaagcccgctaaa
ctctgccatgcccaccccctaggcacgcacctattattagaagtggcacacacctcagcc
ccccaaagtatcctagatgccctcactttttgccaacccaccaatttgggcacttatgcc
agtgtggagcctcgatttggattttaa
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