Helicobacter bilis: XJ32_01055
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Entry
XJ32_01055 CDS
T04788
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
hbl
Helicobacter bilis
Pathway
hbl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hbl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
XJ32_01055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hbl03400
]
XJ32_01055
DNA repair and recombination proteins [BR:
hbl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XJ32_01055
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
XJ32_01055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
ResIII
UVR
DEAD
Pho86
AAA_7
P-loop_SecA
SWI2_SNF2
AAA_22
TsaE
Pyr_redox
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AQQ58918
UniProt:
A0A1Q2LES5
LinkDB
All DBs
Position
224457..226442
Genome browser
AA seq
661 aa
AA seq
DB search
MMKTNLFNLTSNYKPAGDQPQAINFLCKQINNNEKYNTLIGVTGSGKTFSMANIIQNLNM
PTLIMSHNKTLCAQLYSEFKSFFPHNHVEYFISHFDYYQPEAYIPRRDLFIEKDSSINDE
LERLRLSATTSLLAYDDVIVIASVSANYGLGNPSEYLTMIEKLEVSKTYQQKRLLTKLVE
MGYTRNETSFERGCFRVKGEVVDIFPAYNEVEFIRIEFFGDEIERIAVLESLDNTFVKEL
DSYVLYAANQFIVGENRLKNAIVEIEQELQERLKFYESENRMLEYERLKSRTEFDLEMIK
ENGICKGIENYARHLTGKKPGETPFSLLDYFEYKKKPYLLIVDESHVSLPQFGGMYAGDR
SRKEVLVEYGFRLPSALDNRPLQFDEFINKKANFLFVSATPAELELSLSKDNVCEQLIRP
TGLLDPEFEVRDSRIQVKDLLEEIKVCVERKERVLITTLTKKMSEELAKYYAKEGIKIEY
LHSEIDAIERNHLIRNLRLGVFDVLVGINLLREGLDLPEVSLVAIMDADKEGFLRSETSL
IQTMGRAARNVNGKVILYAEKITNSMRKAMDTTTYRRKKQEEFNKKHGITPTSVSRNVEE
ELRLEDSTKVYDKMSKKNKIPAKEKENLIKDLKIKMLEASKRLDFEAAIQLRDEIARLRS
L
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaaacaaatctatttaatttaacctcaaactacaaaccagcaggcgaccagcca
caagctataaatttcctatgcaaacagattaataataatgaaaaatataatactttaata
ggcgttacaggcagcggtaagacctttagcatggcaaatattatacaaaatctcaacatg
ccaacacttatcatgagtcataataagaccttatgtgcccagctttatagcgagtttaaa
agcttttttccacataatcatgtcgaatattttatcagccattttgactactatcagcca
gaagcctacattccgcgtagagatctatttatagaaaaggatagctccattaatgatgag
ttagagagactgcgtctatcggctacgacttcacttcttgcctatgatgatgtgatagtt
atagccagtgtatcagcaaactatggtttaggaaatcctagtgaatacctcacaatgata
gaaaagctagaagtctctaaaacctatcagcaaaaaaggcttttaacaaagcttgtagaa
atgggctatacacgcaatgaaacaagctttgagcgtggatgctttcgtgttaaaggtgaa
gtagtagatattttccctgcgtataatgaagtggagtttatacgcattgaattttttggt
gatgagattgagagaattgcggtattagaatcacttgataatacttttgtaaaagagcta
gattcttatgtgctttatgcggcaaatcaatttattgttggagaaaatcgattaaaaaat
gcgattgtagaaatcgagcaggaattgcaagagcgattgaaattctatgagagtgaaaat
cgtatgctagagtatgaaaggttaaaatcacgcacagaatttgaccttgagatgataaaa
gaaaatggcatttgcaaaggtattgaaaactatgcgagacatttgacaggcaaaaagccc
ggcgaaacccctttttcactacttgattattttgaatacaaaaaaaagccttatctatta
atcgttgatgaaagccatgtaagcctgccacaatttggcggtatgtatgcgggagataga
agccgtaaggaagtattggtagaatatggctttagactgcctagtgcgcttgataatcgc
ccattgcaatttgatgagtttattaacaaaaaggctaactttttatttgtatctgccaca
ccagcagagctagagctatcactaagcaaagataatgtatgtgagcagcttatccgcccg
acaggactgcttgacccagagtttgaagtaagagattctagaatccaagtcaaagattta
ttagaagaaataaaagtttgtgttgagcgaaaagagagggtattaatcacgactttaacc
aaaaaaatgagcgaagaactcgcaaaatactacgcaaaagagggcataaaaatcgaatat
ctacatagtgaaatagatgcgatagagagaaatcacttaatccgcaatctgcgtttaggc
gtatttgatgtattagtagggataaatttattgcgggaagggcttgacttaccagaggtt
agccttgtagcgattatggacgcagataaagagggctttttacgcagtgaaacaagcctt
atacaaacgatgggcagggctgctagaaatgtaaatggcaaggtgattctatacgcagaa
aaaatcacaaattccatgcgtaaagctatggatacaacgacttatagacgcaaaaaacaa
gaagaatttaataaaaaacatggaatcactccaacttcagtaagccgcaatgtagaagag
gaattaagactagaagatagcacaaaagtctatgataaaatgagtaagaaaaacaaaatc
ccagcaaaagaaaaagaaaatcttatcaaagacttaaaaataaaaatgcttgaggcaagc
aaacgacttgactttgaagcggcaatacaactaagagatgaaatcgctagattgcgaagt
ttgtga
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