Helicobacter bilis: XJ32_04600
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Entry
XJ32_04600 CDS
T04788
Name
(GenBank) tRNA pseudouridine synthase
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
hbl
Helicobacter bilis
Brite
KEGG Orthology (KO) [BR:
hbl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hbl03016
]
XJ32_04600
Enzymes [BR:
hbl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
XJ32_04600
Transfer RNA biogenesis [BR:
hbl03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
XJ32_04600
Prokaryotic type
XJ32_04600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
AQQ59494
UniProt:
A0A1Q2LGD3
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All DBs
Position
964715..965479
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AA seq
254 aa
AA seq
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MGLQNIVCIIAYDGSKFCGFSHQKHTKGVLSVANFFELTLQKIGIKAKIIGSGRTDKDVH
ATNQVINFHAKLYMPLEKMKKLLNDRLYPFVLIKRIFIADSNFHARFSARLRIYRYVFTQ
AELLPFYSNYIAKVRHGDISLLQTALNEFIGTHDFSLFKKNGSETKDFIRTIVKAHIFPT
KIHNISCFVAHIGANGFLRSQVRIMLKACFEFSLGRITLQNLVRQIQNDTTLEKSLCVRE
LAPACGLYLHRIIY
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgggacttcaaaatattgtttgcattatcgcttatgatggctcaaagttttgtggcttc
agtcatcaaaagcatacaaaaggtgtgttaagtgtggctaatttttttgagcttactttg
caaaagattggcataaaagcaaaaattattggcagtggtcgcacagataaagatgtgcat
gcgacaaatcaagtgattaattttcacgcaaagctatacatgcctttagaaaagatgaaa
aaactactcaatgatagattatatccatttgttttaattaagagaatctttatcgcagat
tctaactttcatgcgagatttagtgctagattgcggatttatcgctatgttttcacacaa
gctgaattgctgcccttttatagcaactatattgcaaaagtaagacatggcgatatttca
ctcttacaaactgcccttaatgagtttatcggcacacatgatttttcactttttaaaaag
aatggcagtgaaacaaaagattttatacgcacgattgtaaaagcacatattttccccaca
aagattcataatatttcgtgttttgtagcacatattggggcaaatggctttttgcgttcg
caagtaagaattatgcttaaagcttgttttgagtttagtttaggtagaattacacttcaa
aatctagtgcgtcaaatacaaaatgatacaacactagaaaaaagcctatgtgtgcgagag
ttagccccagcttgcgggctatatctgcaccgcattatatattaa
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