Helicobacter bilis: XJ32_05200
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Entry
XJ32_05200 CDS
T04788
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hbl
Helicobacter bilis
Pathway
hbl03420
Nucleotide excision repair
hbl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hbl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
XJ32_05200
03430 Mismatch repair
XJ32_05200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hbl03400
]
XJ32_05200
Enzymes [BR:
hbl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
XJ32_05200
DNA repair and recombination proteins [BR:
hbl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XJ32_05200
MMR (mismatch excision repair)
Other MMR factors
XJ32_05200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
AAA_12
PcrA_UvrD_tudor
eIF3_p135
Motif
Other DBs
NCBI-ProteinID:
AQQ59586
UniProt:
A0A1Q2LGM2
LinkDB
All DBs
Position
complement(1099431..1101566)
Genome browser
AA seq
711 aa
AA seq
DB search
MDILESLNDAQREAAIHVDNALLILAGAGSGKTKTLTTRLAYLLSIGIPAQNTLTLTFTN
KAAREMRERALKLIESMSIPVINTPLLCTFHKFGLLFLQRYIHLLARNSMFNVIDEDDKR
KIIRNIKKNSKNIAKELTPATLSSAISDYKNNAILPDIAKQSPNMIDAQVAKIYQKYEDY
LYANNLVDFDDLLLLPYRILYENETLRTQISNKYQYIMVDEYQDTNNLQASLLKLLCATH
ENLCVVGDDDQSIYSWRGANIENILDFDAQFENTKIVKLEQNYRSTEEILTIANNLISHN
TTRYDKILKATRHNGKKVQYIKSHDDKAEMKQIIESIQTLIAQGESYNDIAILFRLNALA
RNVEECFNRAKIPFKMVGVIRFYDRQEIKDVLAYLRLALNLDDNFSLERIINQPKRSIGE
KTFENIIAASTQYTSIYVAWKQGGLSSLKCHARLSEFFTLIESLRECLQLNPSEIPHFFK
TKIKLYADDIPTKDSESNEDRRKNMDELFATLLDFIECERGGDYASNEEIIQAFLNDIAL
SSSSDMEDSHNVLCMSVHNSKGLEFKHVFVIGMEQGLFPLMNFYEISIDSVDKNTQNLNE
ERRLAYVAFTRAKDTLTLSYAKERMRHGKYREYYPSQFLTECGVVSKQNAILKPEESDKC
VAGLKRGDCVQHKIFGFGRIESVRELGDNSTAMVNFGGTKRNILISFLTKA
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
gtggatattttagaatcacttaatgacgctcaaagagaagccgccatccatgtagataat
gccttgcttatacttgctggggctggaagcggcaaaactaaaacgctaacaacaagactt
gcctatctcttaagtataggtatccccgcacaaaacacattaacattaacattcacaaat
aaagccgcaagagaaatgcgagagagagcattaaagcttatagaatcaatgagtattcct
gtgataaatacccccttgctttgcacctttcataaatttggattgcttttcttacaacgc
tacattcatttacttgcgcgtaattccatgtttaatgtcatagatgaagatgataagcga
aagataatacgaaatataaagaaaaatagcaaaaatatcgcaaaagaattaactcccgca
acactctcaagtgctatatctgattataaaaataatgcgatattgccagatattgcaaag
caaagcccaaacatgatagatgcacaagtcgcaaagatttatcaaaaatatgaagactat
ctttacgcaaataaccttgtagattttgacgacttattactgctaccttatagaatctta
tatgaaaatgaaactttacgcacacaaataagcaataaatatcaatatatcatggtagat
gaatatcaagatacaaacaacctgcaagcaagtcttttaaaacttctatgtgccacacat
gagaatctttgtgtagtaggcgatgatgaccaaagtatttatagttggcgtggtgcaaat
atcgaaaatatcctagactttgatgcccaatttgaaaatacaaagatagtaaagctagag
caaaactatcgcagcacagaagagattctaacaatcgcaaataatcttatatcacacaac
acaacacgatatgataagattctaaaagcaacaaggcataatggcaaaaaagtccaatat
ataaaaagccatgatgacaaagccgagatgaaacagattatagaatctatacagacactc
atagcacagggcgagagctataatgacattgcgatattattccgcttaaacgcacttgca
agaaatgtagaagaatgctttaatcgcgctaagattccattcaaaatggtaggcgttata
cgattttatgatagacaagagattaaagatgtgcttgcctatttgcgtttagccctaaac
cttgatgataacttttcacttgagcgaattatcaatcaaccaaagagaagtatcggcgaa
aagacatttgaaaatataatagccgcaagtacgcaatacacaagcatatatgtcgcatgg
aaacaaggcggattatcttcacttaaatgccatgcaaggctaagcgagttttttacatta
atagaatctttaagggagtgtttgcagcttaatccaagcgaaataccgcatttttttaaa
accaaaataaaactttatgcagatgatataccaacaaaagattctgaaagcaatgaggat
cgcaggaaaaatatggacgagctatttgcgactttgctagattttatagaatgtgagagg
ggcggggattacgctagtaatgaagagataatacaagcatttttaaatgatatagcatta
agctctagtagcgatatggaagattctcacaatgtgctttgcatgagcgtacataatagc
aaggggttagagtttaagcatgtatttgttatcggcatggagcaaggcttatttccatta
atgaatttttatgaaataagtatagattctgttgataaaaacacacaaaatcttaatgaa
gaacgaagacttgcctatgtagcctttacccgtgcaaaagatacacttacgctaagctat
gcaaaagagagaatgcgtcatggcaaatacagagagtattacccatcacaatttttaaca
gaatgtggtgtagtatcaaaacaaaatgcgatattaaaacctgaagaaagtgataaatgt
gtggctgggctaaaacgcggcgattgtgtccagcataaaatatttggctttggcaggata
gaatctgtaagagagctaggcgacaactcaaccgcaatggtaaattttggcggcacaaag
agaaatatccttatatcttttctcacaaaagcataa
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