Helicobacter bilis: XJ32_07955
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Entry
XJ32_07955 CDS
T04788
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
hbl
Helicobacter bilis
Pathway
hbl03030
DNA replication
hbl03430
Mismatch repair
hbl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hbl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
XJ32_07955
03430 Mismatch repair
XJ32_07955
03440 Homologous recombination
XJ32_07955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hbl03032
]
XJ32_07955
03400 DNA repair and recombination proteins [BR:
hbl03400
]
XJ32_07955
Enzymes [BR:
hbl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
XJ32_07955
DNA replication proteins [BR:
hbl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
XJ32_07955
DNA repair and recombination proteins [BR:
hbl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
XJ32_07955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
T2SSK
IFT81_CH
HHH_3
Motif
Other DBs
NCBI-ProteinID:
AQQ60036
UniProt:
A0A1Q2LHT7
LinkDB
All DBs
Position
1737782..1741588
Genome browser
AA seq
1268 aa
AA seq
DB search
MNNTENIPFTHLHLHTEYSLLDGANKLDVLAKRIKELGMNSVAMTDHGNMFGAIEFYKIM
KKAGIKPIIGIEAYIHNKEDLGDKSPNTPKFHICLYAKNEEGYKNLMYLSSQSFIQGFYR
TSRINKKILREYSKGIICSSACLNGEISWNLNLSPYMDSKKRDKKIIMGAKGYDGAKEAI
HEYQDIFGDDFYIEIMRHGIADQRFIDNDLLRLSLETGAKLIATNDAHYTNKEDSSMQEA
AMMIAMATDINDPKRLRHTVQEFYIKSPKQMLDLFMDIPEAVFNTQEIADKCDLTIDLKD
DKNPPTPPSFKFAKEYAENEGLTIQDEAEYFAYKCKQGLVKRLEQVEKDKHEIYHKRLQE
EIDIITQMKFPGYMLIVWDFINYAKQNKIPVGPGRGSAAGSLVAYCLEITDVDPIKYNLL
FERFLNPERISMPDIDTDFCQRRRPEMFEYMKAKYGEYNVAQVITFGKMLARGVIRDVAR
IYGMSIPNADRFAKLIPSKLGITLKGYNKNGNFIEGAYELEPKIQELITEGDNDRDEKNR
GLARKVWEMALRLEKLNRNTGKHAAALVVDSEKELWHKVPLYVSERTKGVMVTQYSMKYL
EPVDLIKFDFLGLKTLTVIQDALDIIKDTNNIDINLSTLDVNDEKVYRTLRSGNTLGIFQ
LESSGMQEFNRRLQPSGIDDAIALLALFRPGPMDSGMSDEYINRKHGRSPVSYTFKELEP
ILKNTYGVIVYQEQVMQIVQVIGGFSLGEADLVRRAMGKKDAQIMAENRTKFADGAEKNG
FDRTKAEELFDQIAKFAEYGFNKSHSAAYGILTFQTAYLKTYYEHEFMAAMLSSESHKIE
AVATYIDEARAMSIEILPPHVNTSQTNFSVIIDSNGKKKIVFGLNAIKGAGEGALQSIID
DRKQKGAFKNLEDFITKADFKRISKKVLEPLVKSGSLDNLGYTRASMLDNLDYICDLGRR
MSRERSGGGLFGAEELCPELQIKPLPELHNKSLLEYEYESLGIYLSGHPLDDFRSEIEQI
KNVVKIAELENIADGSRVMLIGKLEDLQRKMSKNNRTYGTAKIMDFSGKQPLTLFEDQLN
LLDSFDLSNPIGIVGKLEKERMVTEGEDGSAEVSYKIEIRVHEIHTLQSCKEIKLRVKKD
NAKSQTNTQDSKTFTKKSMDSKLHNNAVYGDSILDEANGIEPLNLVADMDIRNSCLCALM
QSVITEEQVSAIANIMRSSQGDTRFGIGFQDSVSGKTFIFESSMYLDERLKHKIEEILPN
CTWKYLAI
NT seq
3807 nt
NT seq
+upstream
nt +downstream
nt
atgaataatacagaaaatataccatttacacatttgcatttacatacagaatattcacta
cttgatggggcaaataagcttgatgtcttagcaaaacgcataaaagagcttggcatgaat
agtgttgcaatgacagaccatggcaatatgtttggggctattgagttttataagattatg
aaaaaagcagggattaagcccattattggcattgaagcctatattcacaataaagaagat
ttaggtgataaatccccaaatacaccaaagtttcatatctgtctttatgcaaagaatgaa
gaaggctataagaatctcatgtatctatcaagccagagttttatacaaggattctatcgc
acttcaaggattaataaaaagattctaagagagtattctaaaggcattatctgctcttct
gcatgtcttaatggcgagatttcatggaatctaaacttaagtccatacatggatagcaaa
aaaagggataaaaaaatcatcatgggggcaaaaggctatgatggggcaaaagaagctata
catgaatatcaagatatttttggcgatgatttttatattgagattatgcgacatggcata
gcagaccaacgctttattgataatgatttgttgcgattaagccttgagacaggggcaaag
ctcattgctacaaatgacgcacattatacaaataaagaagattctagtatgcaagaagca
gccatgatgatagctatggcaactgatattaatgacccaaagagattgcgacacaccgtt
caagagttttatatcaaaagtccaaagcaaatgcttgatttattcatggatataccagaa
gcagtatttaacacacaagaaatagcagataaatgcgaccttaccattgacttaaaagat
gataagaatccacccaccccaccaagctttaagtttgcaaaagagtatgcagaaaatgaa
gggcttacaatacaagatgaagcagaatattttgcctataaatgcaaacaaggtttagta
aaaagattagagcaggtagaaaaagacaagcatgaaatatatcataaacgcctacaagaa
gaaatagatattatcacacagatgaaattccccggctatatgcttattgtatgggatttt
atcaattatgcaaagcaaaataagattccagtaggaccgggcagaggaagtgcggcaggt
agccttgtagcttattgtttagaaattactgatgttgatcctattaagtataatttgctt
tttgagagatttttgaatccagagcgtatatcaatgcccgatattgatactgacttttgc
caaagaagacgcccagaaatgtttgaatacatgaaagcaaaatatggtgaatataatgta
gcacaagttattacctttggtaaaatgctagcaaggggagtgatacgagatgttgctaga
atctatggcatgtctataccaaatgcggatagatttgcaaagcttatcccctcaaagcta
ggcattacactcaaaggctataataaaaacgggaattttatagagggagcatatgagcta
gagccaaagatacaagagcttatcacagaaggcgataacgatagagatgagaaaaatagg
ggacttgcaagaaaagtatgggaaatggctttaagacttgaaaagctaaatagaaatacc
ggcaaacatgccgcagcccttgtggtagattctgaaaaagagttatggcataaagtcccc
ttatatgtgagtgagcggacaaaaggggttatggtaacgcagtattctatgaagtattta
gagccagtggatttaatcaagtttgacttcttgggcttaaaaacactcacggttattcaa
gacgcacttgatattataaaagatacaaataatattgatattaatctctcaacgcttgat
gtgaatgatgaaaaggtatataggacattgcgtagtgggaatacacttgggatattccag
ctagaatctagtggtatgcaggaatttaaccgcagattgcagccaagcggcattgatgat
gctatcgcccttttagcactctttagacccggtcctatggatagtggcatgagtgatgaa
tatattaatagaaagcatggtagaagccctgtaagctatactttcaaagagttagagccg
attctaaaaaatacctatggggtaatagtctatcaagaacaagttatgcaaatcgtgcaa
gttataggtggattctcactcggtgaagcggaccttgtaagaagggcaatgggtaaaaaa
gacgcacaaatcatggcagaaaatcgcacaaagtttgccgatggtgcagagaaaaatggc
tttgataggacaaaagcagaagagctttttgaccagatagcaaagtttgcagagtatgga
ttcaataaatcgcattcagccgcttatggaatcttaacctttcaaaccgcctatttaaag
acctattatgagcatgagtttatggcagcaatgctatcaagcgaaagtcataaaatagaa
gcagtcgctacatacatagatgaagcaagggctatgagtattgagattttacccccgcat
gtaaatacctcgcaaactaacttttctgtaataatagattctaatggtaaaaagaaaatc
gtctttgggttgaatgcgattaaaggtgcaggagaaggggctttgcaaagcattatcgat
gatagaaaacaaaaaggtgcttttaagaatcttgaagactttatcacaaaagcagatttt
aagagaatctctaaaaaagtgcttgaacccttagtaaaaagtggtagccttgataatctt
ggctacacgcgtgcaagtatgcttgataatcttgattatatttgcgatttaggcaggaga
atgtctagggaacgcagtggtggtgggctatttggtgcagaagagttgtgtcctgaatta
cagataaagcctttgccagaactacataataaaagcttgcttgaatatgaatatgaaagt
ttgggaatctatctaagcggacatccgcttgatgactttagaagtgagatagagcaaata
aaaaatgttgtaaaaatcgcagagttagagaatatcgccgatggatcaagggttatgctt
ataggaaagctagaagacttacagcgaaaaatgagtaaaaataaccgcacttatggcaca
gcaaagattatggactttagcggtaagcaacctttaactttatttgaagatcaactcaac
ctgcttgatagctttgatctaagcaatcctattggcatagtaggcaaacttgaaaaagag
agaatggtaacagagggcgaagatggcagtgctgaggtaagctataaaatagaaataaga
gtgcatgaaatccacacattacaatcatgtaaagagataaaattgcgtgtgaaaaaagat
aatgcaaaatcacaaacaaatacacaagattctaaaacttttacaaagaaatctatggat
tctaagctgcataataacgctgtatatggagattctatccttgatgaagcaaatggcatt
gagccgcttaatctcgtagcagatatggatataagaaactcatgtttatgtgcgttaatg
caaagcgttatcacagaagaacaagtgagtgctatagcaaatattatgcgttcatctcaa
ggtgatacaagatttggtatcggctttcaagatagtgtgagtggtaaaacctttattttt
gagagtagcatgtatcttgatgagagattaaaacataagatagaagagatactgcccaat
tgcacttggaaatatctagcaatttag
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