Hymenobacter busanensis: GUY19_00675
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Entry
GUY19_00675 CDS
T07319
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
hbn
Hymenobacter busanensis
Brite
KEGG Orthology (KO) [BR:
hbn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hbn03009
]
GUY19_00675 (rlmD)
Enzymes [BR:
hbn01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
GUY19_00675 (rlmD)
Ribosome biogenesis [BR:
hbn03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
GUY19_00675 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_15
TRAM
MTS
Methyltransf_25
N6_N4_Mtase
TRM5-TYW2_MTfase
Methyltransf_11
PrmA
Cons_hypoth95
Motif
Other DBs
NCBI-ProteinID:
QHJ09555
LinkDB
All DBs
Position
complement(149844..151256)
Genome browser
AA seq
470 aa
AA seq
DB search
MPNPKKIPAEDLREVVIQDMVAEGKCLVRHNNLVIFVSGVAPGDVVDLRITKSKKSFLEA
VPVHFHKYSELRVQPFCIHFGTCGGCKWQHLGYETQLQYKQQQVSDTLQRIGKVELPDIM
PILGSKETTYYRNKLEYTFSYNGWLTSEQIADETQQYDRRVLGYHLPSRFDKIIDIQHCW
LQPDPSNQIRLAFRDYARQNNLRFGNLFKHTGLLRTLTIRTAKSTGELMVVAVFYRQHQL
IPVILDHLLELFPEVTSMNYVLNDKGNDSLDGLDVVCYKGLPYIHEEMEGLRFRVGPKSF
YQTNSEQAYELYKITRDFAGLTGTELVYDLYTGAGTIANFVAKQAREVIGIEYVEQAIED
AKLNSEINGVPNTKFYAGDMKDVLTKDFTDEHGRPDVIITDPPRAGMHPDVVQRLIELRA
PRVVYVSCNPATQARDLELLADTYRVTRVQPVDMFPHTHHVENVVLLELK
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgcccaacccgaagaaaatccccgcggaggacctccgcgaagtggtcattcaagacatg
gtcgccgaaggcaagtgcctggtgcgccacaacaacctggtcatcttcgtctcgggcgta
gcgcccggcgacgtggtcgacctgcgcatcaccaagtcgaaaaagagcttcctggaagcc
gtgcccgtgcacttccacaagtactccgagctgcgcgtgcagcccttctgcattcacttc
ggtacctgcggcggctgcaagtggcagcacctgggctacgaaacccagctccagtacaag
cagcagcaggtgagcgacaccttgcagcgcatcggcaaagtggaactgcccgacatcatg
cccatcctcggctcgaaggagacgacctactaccgcaacaagctcgaatacaccttcagc
tacaatggctggctgacctcggagcagattgcggacgaaacgcagcagtacgaccgccgc
gtgctgggctaccacctgcccagccgtttcgacaagatcatcgacatccagcactgctgg
ctgcagcccgacccaagcaaccagattcgcctggccttccgcgactacgcccgccagaac
aacctgcgcttcggcaacctcttcaagcataccgggctgctgcgcacgctcaccatccgc
accgccaagagcaccggcgagctgatggtggtggccgtgttctaccgccagcaccagctc
attcccgtcattctcgaccacctgctggagctgttcccggaagtcacgtcgatgaactac
gtgctcaacgacaagggcaacgactcgctcgacggcctggacgtggtgtgctacaagggc
ctgccctacatccacgaagagatggaaggcctgcgcttccgcgtggggccgaagtcgttt
taccaaaccaactccgagcaggcctacgagctgtacaaaatcacccgcgacttcgccggc
ctgacgggtaccgagctggtgtacgacctctacaccggcgctggtaccattgccaacttt
gtggccaagcaggcccgcgaggtcatcggcatcgagtacgtggagcaggccattgaagac
gctaagctgaactcggaaatcaacggcgtgccgaacaccaaattctacgccggcgacatg
aaggacgtgctcaccaaggacttcaccgacgagcacggccgccccgacgtcatcatcacc
gacccgccccgcgccggcatgcaccccgacgtggtgcagcgcctcatcgagctgcgcgcc
ccgcgcgtggtgtacgtaagctgcaaccccgccacccaggcccgcgacctggagctgctg
gccgatacctaccgcgtaacccgcgtgcagccggtggacatgttcccgcacacccaccac
gtagaaaacgtggtgctgctggagctgaagtag
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