Hymenobacter busanensis: GUY19_01475
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Entry
GUY19_01475 CDS
T07319
Name
(GenBank) RtcB family protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
hbn
Hymenobacter busanensis
Brite
KEGG Orthology (KO) [BR:
hbn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hbn03016
]
GUY19_01475
Enzymes [BR:
hbn01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
GUY19_01475
Transfer RNA biogenesis [BR:
hbn03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
GUY19_01475
Prokaryotic type
tRNA splicing ligases
GUY19_01475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
QHJ06033
LinkDB
All DBs
Position
345707..347143
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AA seq
478 aa
AA seq
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MAKNTQKLHGKDLRQLGFTDDKQISLALDILDQRELRKLDKGSALALLRDIKADPFKYVR
DQVWRPLAQELVPQPSRDVALNPSIKDYRRYGDAFIEDGARKQMDTAMQLPVTIDGALMP
DAHQGYGLPIGGVLAVDNAVIPYGVGMDIGCRMALSVFDVPPRYLEQRRDELKKLLHNHT
RFGNKEVFKNPADDPVLERPEFREIGVVRGKREAAISQLGSSGSGNHFVEWGIVDITAED
NELNLPLGQYLGLLSHSGSRGLGAAIAQHYTKVAMNKCPLPPEARYLAWLGLDTQEGQEY
WAAMNLAGDYASACHRDIHRRLAKALGQDVLAKVENHHNFAWKEELPDGRQAVVHRKGAT
PAGAGVLGVIPGSMTAPGFIVRGRGERDSIQSASHGAGRRLSRTQAKQQVTEGELRRLLR
DQGVELIGGGLDEAPMAYKDIHQVMAHQRDLVDVLGSFTPRIVRMDAGGSGKSRYGGE
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaaacacccaaaagctccacggcaaggacctgcgccagctcggcttcaccgac
gacaaacagatcagcctagccctcgacattctcgaccagcgcgagctgcgcaaactcgat
aaaggcagcgccctagcgttgctgcgcgacataaaagccgaccccttcaagtacgtgcgc
gaccaagtttggcgccccctggcccaggagctggtgccccaaccgagccgcgacgtggcc
ctgaaccccagcatcaaggactaccgccgctacggcgacgccttcattgaggacggggcg
cgcaagcaaatggacaccgccatgcagttgcccgtcaccatcgacggggccttgatgccc
gacgcgcaccaaggctacggcctgcccatcggcggggtgctggccgtcgacaacgcggta
attccctacggcgtgggcatggacatcggctgccgcatggccctgtcggtgttcgatgtg
ccgccgcgctacctggagcagcgccgcgacgagctcaagaaactgctgcacaaccacacc
cgcttcggcaacaaggaagtgtttaagaaccccgccgacgacccggtgctggagcggccc
gagttccgggaaatcggggtggtgcgcggcaagcgcgaggcggccatcagccagctcggc
tcgtcgggctccggcaaccactttgtggagtggggcatcgtcgacatcacggccgaggac
aacgagctgaatttgccgctgggccagtacctggggctgctctcgcactctggctcgcgc
gggttgggggcggccattgcccagcactacaccaaggtggccatgaacaagtgcccgctg
ccgcccgaagcccgctacctcgcttggcttgggctcgacacccaggaaggccaggagtat
tgggcggccatgaacctagccggcgactacgcctcggcctgccaccgcgacattcaccgc
cgcctcgccaaagccctggggcaggacgtgctggccaaggtagaaaaccaccacaacttc
gcctggaaagaagagctgcccgacggccgccaggccgtggtgcaccgcaagggcgccacg
ccggccggcgcgggcgtgctgggcgtgattcccggctccatgaccgcaccgggtttcatc
gtgcgcgggcgcggcgagcgggattccattcagtcggcttcgcacggggcggggcggcgc
ctctcgcgcacccaggccaagcagcaggtaaccgaaggcgagctgcggcggctcttgcgc
gaccagggcgtggagctgattggtggcgggctggacgaggccccgatggcctacaaggac
attcaccaggtaatggcgcaccagcgcgatttggtggatgtgctgggctcgttcacgccg
cgcatcgtgcgcatggacgcgggcggctcgggcaaaagcaggtacggcggggagtag
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