Hymenobacter busanensis: GUY19_12935
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Entry
GUY19_12935 CDS
T07319
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
hbn
Hymenobacter busanensis
Brite
KEGG Orthology (KO) [BR:
hbn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hbn03009
]
GUY19_12935 (rimO)
Enzymes [BR:
hbn01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
GUY19_12935 (rimO)
Ribosome biogenesis [BR:
hbn03009
]
Prokaryotic type
ribosomal protein modification factors
GUY19_12935 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
QHJ08141
LinkDB
All DBs
Position
complement(2997454..2998779)
Genome browser
AA seq
441 aa
AA seq
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MKVKGNRANKVNVITLGCSKNLVDSEVLMGQLRGNGYDVTHESTKDESGIVIINTCGFID
NAKQESIDTILQYADAKEAGKVDKVYVTGCLSQRYKDQLEVEIPQVDAYFGTLELPQLLK
TLNADYKHELVGERLLTTPKHYAYFKIAEGCNRPCSFCAIPLMRGKHVDKPMDDLVTEAK
KLAALGTKELILIAQDLTYYGLEKYGERKLAELVRRLSDVNGIDWIRLQYAYPSQFPMEV
LDVMQERENVCKYLDMPLQHISDNMLKTMRRGITKRRTLELVDQIRQRMPDIALRTTLIA
GHPGETGQDFAELYDFVEQARFERLGIFTYSHEESTHAYTLEDNVPDEVKQERADAIMEL
QQGISMDLNEAKVGQTYKVLFDRKESGYWVGRTQYDSPEVDNEVLVPATEQYVRVGDFAQ
VRITSASDFDLYGEVVGAAGH
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtaaaaggcaatcgggccaacaaggtcaacgtcatcacgctgggctgctccaaa
aacctggtcgactcggaagtattgatgggccagctgcgcggcaacggctacgatgtgacg
cacgaatcgaccaaggacgagtcgggcattgtcatcatcaacacctgcggcttcatcgac
aacgccaagcaggaaagcatcgacaccattctgcaatacgccgacgcgaaggaagccggc
aaggtggataaggtgtatgtgacgggctgcctctcgcagcgctacaaagaccagctggaa
gtggaaattccgcaggtcgacgcctacttcggcaccctggagctgccccagctgctcaag
acgctgaacgccgactacaagcacgagttggtgggcgagcggctgctgaccacgcccaag
cactacgcctacttcaagattgccgagggctgcaaccgcccctgctcgttctgcgccatc
ccgctgatgcgcggcaagcacgtggacaagcccatggacgacttggtgaccgaagccaaa
aagctggcggccttgggtaccaaagagctgattctgattgcgcaagacctgacctactac
ggcctggagaaatacggcgagcggaaactggccgagctggtgcgccgcttgtcggacgtg
aatggcatcgactggattcgcttgcagtacgcctacccctcgcagtttccgatggaagtg
ctggacgtgatgcaggagcgcgaaaacgtgtgcaagtacctggatatgcccttgcagcac
atttccgacaatatgctcaagaccatgcgccgcggcattaccaagcgccgcacgctggaa
ctggtcgaccagattcggcagcgcatgcccgacattgccctgcgcaccaccctcattgcc
ggccaccccggcgaaaccggccaggacttcgctgagctctacgacttcgtggagcaggcc
cgcttcgagcgcctcggcatcttcacctactcgcacgaggaaagcacccacgcctacacg
ctggaagacaacgtgcccgacgaggtgaagcaggagcgcgccgacgccatcatggagctg
cagcagggcatttcgatggacttgaatgaggccaaagtaggccagacctacaaagtgctc
ttcgaccgcaaggaaagcggctactgggtgggccgcacgcagtacgactcgcccgaagta
gacaacgaagtgctggtgcccgccaccgagcagtacgtgcgagtgggcgacttcgcgcag
gtgcgcatcaccagtgcctccgacttcgacctgtacggggaagtggtgggcgcggcgggg
cactag
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