Hymenobacter busanensis: GUY19_15015
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Entry
GUY19_15015 CDS
T07319
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
hbn
Hymenobacter busanensis
Pathway
hbn03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hbn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GUY19_15015 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hbn03400
]
GUY19_15015 (uvrA)
DNA repair and recombination proteins [BR:
hbn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GUY19_15015 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
GUY19_15015 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
nSTAND1
AAA_21
AAA_29
DnaJ_CXXCXGXG
RsgA_GTPase
AAA_16
AAA_25
AAA_15
PPPI_inhib
CA109-like
Motif
Other DBs
NCBI-ProteinID:
QHJ09719
LinkDB
All DBs
Position
3486390..3489290
Genome browser
AA seq
966 aa
AA seq
DB search
MVAPAAAAVHSSAATIEAPFIEVYGAREHNLKNVSIKIPRGKLVVFTGISGSGKSSLAFD
TIYAEGQRRYMETFSAYARSFMGGLERPDVDKIEGLSPVISIEQKTTSRNPRSTVGTITE
IYDFLRLLYARTAEAFSYATGKKMIRQSDDQIINYILKHFADKKLVVLAPVVKGRKGHYR
ELFQQIAKLGFTKVRVDGELLDITAKMQVDRYKIHDIEIVIDRLVVKEEDRFRLSGSVQN
ALTHGKGTALVLDPDSKKTQFFSRFLMDPTTGIAYDDPAPNTFSFNSPYGACPTCNGLGE
IQQITEESVMPDPKLSISRGGIAPLGEYRDIWIFQQIGLILKKHKATLSTPIEKLPAELV
QRLLHGIEADEDADDKKKATYSEPFEGIIPFLRRQMESDSENIREWIQQYTQATECPECH
GYRLKKESLHFRMADKHIGELSVMDIGELARWFEGLEDRLSDRQNLIARELLKEIRKRIG
FLLEVGLEYLNLHRSVRTLSGGESQRIRLATQIGTQLVGVLYIMDEPSIGLHQRDNERLI
NALKHLRDLGNSIIVVEHDKDMIQHADHVLDIGPGAGIHGGHVVAEGTPEEFQRSGSLTA
QYLNGDKHIELRKKKRTGEGTELVLKGAKGHNLKNVTLKVPLGKLVAVTGVSGSGKSSLI
HDTLYPILNKYFFNAKREPLAYGSIEGLELIDKVIEVDQSPIGRTPRSNPATYTGVFTEI
RQLYANLPEAKIRGYGPGRFSFNVKGGRCETCEGAGIRTIEMNFLPDVHVQCETCKGRRY
NRETLEVRFKGKSITDVLDMTIEKAVDFFEFQPRILRKIKTLSEVGLGYITLGQQATTLS
GGEAQRVKLATELSKKDTGKTFYILDEPTTGLHFEDIRHLADVLQKLADKGNTVLIIEHN
LDLIKVADHIIDLGPEGGAGGGTIVAQGTPEQVAKVKKGHTARFLAEELKISKYADEQDA
AKEEAA
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
ctggtggcgcctgctgcggcggctgtccactcgtcggcggctaccattgaggcgccgttt
attgaagtgtatggcgcgcgggagcacaacctgaagaacgtatccatcaagattccgcgc
ggcaagctggtggtgtttaccggcatttcgggctcgggcaagtcgtcgttggccttcgac
acgatttacgccgagggccagcgccgctacatggagacgttttcggcctacgcccgctcg
ttcatgggtggcctggagcgccccgatgtcgacaagattgagggcctctcgccggttatc
agcatcgagcagaagaccacctcgcgcaacccgcgctccacggtgggcaccatcaccgag
atatacgacttcctgcgtctgctctacgcccgtaccgccgaggctttcagctacgccacg
ggtaagaagatgatccggcagtcggacgaccagatcattaactacatcctcaagcacttc
gccgacaaaaagctggtggtgctggcgcccgtggtgaaaggccgcaaaggccactaccgc
gagctgttccagcagattgccaagctcggcttcaccaaggtgcgcgtcgatggcgagctg
ctcgacattacggccaagatgcaggtggaccgctacaaaatccacgacatcgaaatcgtc
atcgaccggctggtggtgaaggaagaagaccggttccgcctgtccggctcggtgcagaac
gcgctgacccacggcaaaggcacggccctggtgctcgaccccgattccaagaagacgcag
tttttctcgcgctttctaatggacccgaccaccggcattgcctacgacgacccggcgccc
aacaccttctcgttcaactcaccctacggcgcctgccccacctgcaacggcctgggcgaa
atccagcagattaccgaggaatcggtgatgcccgaccccaagctgagcatcagccgcggc
ggcattgcgccgctgggtgagtaccgcgacatctggattttccagcagatcgggctgatt
ctcaagaagcacaaagctacgctctccacgcccatcgagaagctgcctgccgagctggtg
cagcgcctgctgcacggaatcgaagccgacgaagacgccgacgacaagaaaaaagccacc
tactccgagccgttcgagggcatcattcccttcctgcgccgccagatggagtccgattcg
gagaacatccgggagtggattcagcagtacacgcaggccaccgaatgccccgagtgccac
ggctaccgcctcaagaaagagagcctgcacttccgcatggccgacaagcacatcggtgag
ctgtcggtgatggacatcggcgagctggcccgctggtttgagggcttggaagaccgcctg
agcgaccggcagaacctgattgcccgcgagctgctcaaggaaatccgcaagcgtatcggc
ttcctgctcgaagtaggcctggaatacctgaacctgcaccgctcggtgcgcacgctctcc
ggtggcgagtcgcagcgcattcgtctggccacccaaattggtacccagctcgtgggcgtg
ctctacatcatggacgagcccagtattggcctgcaccagcgcgacaacgagcggctcatc
aacgccctcaagcacttgcgcgacctgggcaactccatcattgtggtggagcacgacaaa
gacatgattcagcacgccgaccacgtgctcgacatcggccccggcgccggcattcacggc
gggcacgtggtggccgaaggcacgcccgaggagttccagcgcagcggctcgctcacggcc
cagtacctcaacggcgacaagcacattgagctgcgcaagaaaaagcgcaccggcgaaggc
accgaactggtgctgaaaggtgctaaaggccacaacctcaagaacgtgacgctaaaggtg
ccgctgggcaagctggtagccgttacgggcgtatcgggctcgggcaagtcgtcgctcatt
cacgacacgctctacccgatcctgaacaagtacttcttcaacgccaagcgcgagccgctg
gcctacggcagcattgaaggcttggagctgattgacaaggttatcgaagtggaccagtcg
ccgattgggcgcacgccacgctcgaacccggccacctataccggcgtgttcaccgaaatc
cgccagctctacgccaacctgcccgaggccaaaatccgcggctacggccccggccgtttt
tccttcaacgtgaagggcggccgctgcgaaacctgcgagggtgccggcatccgcaccatc
gaaatgaacttcctgcccgacgtgcacgtgcagtgcgaaacctgcaagggccgccgctac
aaccgcgaaacgctggaggtgcgcttcaagggcaagtccatcaccgacgtgctcgacatg
accatcgagaaggccgtcgatttctttgagtttcagccgcgcatcctgcgcaaaatcaag
acgctgagcgaagtagggttgggctacatcacgctggggcagcaagccaccacgctatcg
ggcggcgaggcgcagcgcgtgaaactggccaccgagctaagcaagaaggacaccggcaaa
accttctacattctcgacgagcccaccaccggcctgcactttgaggacatccgtcacctg
gccgatgtgttgcagaagctggccgacaagggcaacacggtcctcatcatcgagcacaac
ctcgacctgatcaaagtcgccgaccacatcatcgaccttgggcccgaaggcggcgcgggc
ggcggcaccattgtggcgcagggtacgcccgagcaagtggccaaggtgaagaagggccac
acggcccggttcctggccgaggagctgaaaatcagcaagtacgccgacgagcaggacgcc
gcgaaggaagaagcggcgtaa
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