KEGG   Hymenobacter busanensis: GUY19_16235
Entry
GUY19_16235       CDS       T07319                                 
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
  KO
K03701  excinuclease ABC subunit A
Organism
hbn  Hymenobacter busanensis
Pathway
hbn03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:hbn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    GUY19_16235 (uvrA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hbn03400]
    GUY19_16235 (uvrA)
DNA repair and recombination proteins [BR:hbn03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     GUY19_16235 (uvrA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      GUY19_16235 (uvrA)
SSDB
Motif
Pfam: UvrA_inter ABC_tran SMC_N UvrA_DNA-bind AAA_21 AAA_29 nSTAND1 AAA_16 RsgA_GTPase AAA_22 DnaJ_CXXCXGXG AAA_23 AAA_33 ATPase nSTAND3 Viral_helicase1 NACHT cobW NTPase_1 DUF2972
Other DBs
NCBI-ProteinID: QHJ08750
LinkDB
Position
3778308..3781142
AA seq 944 aa
MAQDNLQVAAPAADPIDQLDPREFIIIKNARVHNLKNLSVAFPRNKFIVVTGLSGSGKSS
LAFDTLYAEGQRMYVESLSSYARQFLGRMDKPDVDYIRGISPAIAIEQKVTVRNNRSTVG
TSTEIYDYLKLFFARVGRTFSPISGREVRKDTVSDVVDFLFSLPADTRVMIIAPLIPAEA
GRPLRKELDLLLQKGYSRVLINGEMAFIEDLLGEGKPEPAGEVQIMIDRAVIQPDDEDLQ
FRLSDSVQTAFFEGHGTCFVKLTDETHTFSDRFELDGISFEEPTVNFFSFNNPYGACQRC
EGYGSVLGIDPDLVIPDKTLTVYEGAIAPWRTEKQSEWLKPLLKNGIRFDFPIHRPYNEL
TEAEQRLLWEGNKHFDGLNAYFEWVQTQTHKIQYRVLQSRYRGRTVCPDCRGTRLRKDAQ
YVRVAGKNIADLVLLPIRDALQFFENLDLSEHDMAVSERLVTEVHNRLSYLVRVGLGYLT
LNRLSNTLSGGESQRIQLATSLGSALVGSMYVLDEPSIGLHPKDAEQLIGVLRSLQQLGN
TVVVVEHEEKMMEVADQIIDIGPEAGSGGGNLMFQGTYDELLQDTSTYTGQYLSGKMEVP
VPKVRRPWRNTIEVVGARENNLKNLTVKFPLGVMTVVTGVSGSGKSTLVKRILYPGLARH
LGGTSSESIGKFDKLAGDLSQVSHVEFVDQNPIGKSSRSNPVTYVKAYDAIRTLFADQPL
AKARGLKPSHFSFNIEGGRCEVCQGEGQVKIEMQFMADIFLTCEACNGRKFKQDILEVKY
KDKGIDEVLELTVEDSLDFFAEHPKVAERLKPLNDVGLGYIRLGQSANTLSGGEAQRVKL
ASFLTKGATLQSDKILFVFDEPSTGLHFHDINKLLTALNALVEQGNSVLIIEHNMDIVKA
ADWVIDLGPEGGLNGGHLLFEGTPEAFAKLKGTNDTARFLAEKL
NT seq 2835 nt   +upstreamnt  +downstreamnt
atggcccaggataacctgcaggtagccgccccggctgccgacccgattgaccagctcgac
ccgcgcgagttcatcatcatcaaaaacgcgcgcgtccacaacctcaagaacctgagcgtg
gcctttccgcgcaacaagttcatcgtcgtcacgggcctctcgggctcgggcaaatcgtcc
ctggctttcgatacgctctacgccgagggccagcgcatgtacgtggaaagcctaagctcc
tacgcccgccagtttctggggcgcatggacaagcccgacgtcgactacattcgcggtatt
tcgccggccattgccatcgagcaaaaggtgacggtgcgcaacaaccgctcgacggtgggc
accagcaccgagatatacgactacctcaagctgttcttcgcccgcgtgggccgcacgttc
tcgcccatctcgggccgcgaggtgcgcaaagacacggtgagcgacgtagtggacttcctg
ttctcgctgcccgccgacacccgcgtgatgatcatcgcgccgctgattccggccgaggcg
ggccgcccgctgcgcaaggagctggatctgctcctccaaaaaggctactcccgcgtgctc
atcaacggcgaaatggccttcatcgaagatttgctgggcgaaggcaagcccgagccggcc
ggggaggtgcagatcatgattgaccgcgccgtcattcagcccgacgacgaggatttgcag
ttccgcctctccgactcggtgcagaccgccttcttcgagggccacggcacctgcttcgtg
aagctcaccgacgagacgcacaccttctccgaccgcttcgagctggacggcatcagcttc
gaggagccgacggtcaacttcttttccttcaacaacccttacggcgcctgccagcgctgc
gaggggtacggttcggtgctgggcatcgaccccgacctcgttattcccgacaaaaccctg
acggtgtacgagggcgccattgccccgtggcgcaccgaaaagcagagcgaatggctcaaa
cccctgctcaaaaacggcatccgcttcgatttccccattcaccggccctacaacgagctg
actgaggccgagcagcgcctcttgtgggaaggtaataagcacttcgacggcctgaacgcc
tacttcgagtgggtgcagacgcagacgcacaagattcagtaccgggtgctgcagagccgc
taccggggccgcaccgtgtgccccgactgccgcggcacccgcctgcgcaaagacgcccag
tacgtgcgcgtggccggcaagaacattgccgacctggtgctgctgcccatccgcgacgcg
ctgcagttcttcgagaacctcgacctctccgagcacgacatggccgtgtcggagcgcttg
gtgacggaggtgcacaaccgcctgagctacctggtgcgcgtgggcctgggctacctgacc
ctgaaccgcctgtccaacacactgtcgggcggcgagtcgcagcgcattcagctggccacg
tcgctcggctcggccctggtgggctccatgtacgtgctcgacgagcccagcatcgggctg
caccccaaggatgccgagcagctcatcggcgtgctgcgctccttgcagcagctcggcaac
acggtcgtggtcgtcgagcacgaggagaagatgatggaagtggccgaccagatcatcgac
atcggccccgaggccggctcgggcggcggcaacctgatgttccagggcacttacgacgag
ctgctgcaggacaccagcacctacaccgggcaatacctgagcggcaaaatggaagtgccg
gtgcccaaggtgcgccggccctggcgcaacaccattgaggtggtgggcgcccgcgaaaac
aaccttaagaacctcaccgtgaagttcccgttgggcgtaatgacggtggtgacgggcgtt
tccggctcgggtaagtcaacgctggtgaagcgtattctgtaccccggcctggcgcggcac
ctgggcggcacctcgtcggaaagcatcggcaagttcgacaagctcgccggcgacctgtcg
caggtgtcgcacgtggagtttgtcgaccagaaccccatcggcaagagcagccgctcgaac
ccggtgacctacgtaaaggcctacgacgccatccgcacgctcttcgccgaccagccgctg
gccaaggcccgcgggctgaaaccctcgcacttcagcttcaacatcgagggcggccgctgc
gaggtgtgccagggcgaaggccaggtgaaaatcgagatgcagttcatggccgacatcttc
ctgacctgcgaggcctgcaacgggcgcaagttcaagcaggacattctggaggtgaagtac
aaggacaagggcatcgacgaggtgctggagctgacggtggaagattcgctcgacttcttt
gccgagcaccccaaagtggccgagcgcctcaagccgctcaacgatgtgggcctgggctac
atccgcctggggcagtcggccaacacgctgtcgggcggcgaggcccagcgcgtgaagctg
gcctcgttcctcaccaaaggcgctacgctgcagtccgacaagattctgttcgtgttcgac
gagcccagcaccggcctgcacttccacgacatcaacaagctgctcacggccctgaacgcg
ctggtggagcagggcaactcggtgctcatcatcgagcacaacatggacatcgtgaaagcc
gccgactgggttatcgacctggggcccgaaggcggcctcaacggcggccacctgctcttc
gaaggcacacccgaagcctttgccaagctcaaaggcaccaacgacacggcccgattcctg
gccgaaaagctctaa

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