Hymenobacter busanensis: GUY19_17015
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Entry
GUY19_17015 CDS
T07319
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
hbn
Hymenobacter busanensis
Pathway
hbn03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hbn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
GUY19_17015 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hbn03021
]
GUY19_17015 (rpoC)
03400 DNA repair and recombination proteins [BR:
hbn03400
]
GUY19_17015 (rpoC)
Enzymes [BR:
hbn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
GUY19_17015 (rpoC)
Transcription machinery [BR:
hbn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
GUY19_17015 (rpoC)
DNA repair and recombination proteins [BR:
hbn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
GUY19_17015 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
RPOC_hybrid
Motif
Other DBs
NCBI-ProteinID:
QHJ08892
LinkDB
All DBs
Position
3966206..3970549
Genome browser
AA seq
1447 aa
AA seq
DB search
MAFAKTKKLVQDFSKVTISLASPEAILERSNGEVVKPETINYRTYKPEMGGLFCERIFGP
VKDWECHCGKYKRIRYKGIICDRCGVEVTEKKVRRERMGHIELVVPVAHIWYFKSLPNKI
GYLLGMPTKKLDQIIYYERYVVVQPGVLETEGVQQYDFLTEDEYLDIIDKLPRENQMLPN
EDPQKFIARMGADALYMLLERLNLDELSYSLRDSAAHETSQQRKAEALKRLRVVEAFREA
NGRIENRPEWMVIRMVPVIPPELRPLVPLDGGRFATSDLNDLYRRVIIRNNRLKRLIEIK
APEVILRNEKRMLQEAVDSLFDNSRKVNAVRAEGNRALKSLSDMLKGKQGRFRQNLLGKR
VDYSGRSVIVVGPELKLHECGLPKNMAAELFKPFIIRKLIERGIVKTVKSAKKIVDRKDA
VVWDILENVLKGHPVLLNRAPTLHRLGIQAFQPRLIEGKAIQLHPLVCTAFNADFDGDQM
AVHVPLGPAAVLEASMLMLASHNILNPANGAPIAVPSQDMVLGLYYVTKGKRSTDEEKIK
GEGMTFYSAEEVVIAINEGQLSKQAYIKVRTVVRDEEDNLVTKIIETVAGRVLFNLHVPQ
EVGFVDELLTKKKLQQIISLVFKRTGMARTAQFLDDIKTLGFQSAFKGGLSMGLGDIQIP
KEKDALIAQAKADVDAVTQNYQMGLITDNERYNQVIDIWTRINNQITETLMRRLETDDQG
FNSIYMMMHSGARGSREQIRQLGGMRGLMAKPQKSLQGSVGEIIENPILSNFKEGLDVIE
YFISTHGARKGLADTALKTADAGYLTRRLVDVSQDVIVNDVDCGTLRGIETFALKDNEDV
VEPLAERILGRVAVHDIIDPLTDEVILTAGDEITEEITRRIDQTSIESVEIRSVLTCEAK
RGICARCYGRNLSSGRMVQRGEAVGVIAAQSIGEPGTQLTLRTFHVGGTASNIAVEASIR
AKFAGVVEFEDIRTVDTVTDEGVKGKVVMGRSGEVRIVEKGTGKVYISNHVPYGSFLVVD
EGQEVEKGAELCNWDPYNAVILAEFDGTINYDGIKEGITYREESDEQTGHREKVIIESKD
KTLAPAIIVKAGKKGGDEAQKAYNIPVGSHISVENGEKIKAGHILAKIPRAVGKTRDITG
GLPRVTELFEARNPSNPAVVSEIDGVVTYGTVKRGNREIFVESKDGVKKKYMVPLSKHIL
VQDNDFIRAGAPLSDGAITPIDILNIQGPGAVQEYLVNEIQEVYRLQGVKINDKHIEVVV
RQMMQKVVIIDPGDTSFLEHQVIDKVTFMEENDSIIDMKVVTEEGDSTELKRGQIVTARK
LRDENSSLRRRDLKLVEVRDASPAVSRPTLQGITQASLGTQSFISAASFQETTKVLSEAA
IRGKADELLGLKENVIVGHLIPAGTGLRDYQRIIVGSTEDPEPVAAAPAAAEARPRASRS
KREVSAE
NT seq
4344 nt
NT seq
+upstream
nt +downstream
nt
atggcgtttgcaaaaaccaagaagttagtgcaggacttctcgaaagtcaccatctcgctc
gcctcgcccgaagccattctggagcggtcgaacggcgaagtggtgaagcccgagacgatc
aactaccggacgtacaagcccgaaatgggcggtctgttctgtgagcggatcttcgggccg
gtgaaggactgggaatgccattgcggcaaatacaagcgcattcgctacaaaggcatcatc
tgcgaccgttgcggcgtggaggtgaccgagaagaaagtgcgccgtgagcggatgggccac
atcgaactggtggtgcccgtagcccatatctggtacttcaagtcgctgccgaataaaatt
ggctacctgctgggtatgcctaccaaaaagctcgaccagatcatctactacgagcgttac
gtggtagtgcagccgggcgtattggagacggaaggcgtgcagcagtacgacttcctgacc
gaagatgaatacctggacatcatcgacaagctccctcgcgagaaccagatgctgcccaac
gaggacccgcagaagttcatcgcccgcatgggtgccgacgcgctctacatgctgctcgag
cgcctgaacctggacgagctgagctattcgctgcgtgactccgccgcccacgaaacttcg
cagcagcgtaaagccgaagcgttgaagcgtctgcgcgtggtggaagccttccgcgaagcc
aacggccgcatcgagaaccgccccgagtggatggtgattcgcatggtgccggtgattccg
ccggaactgcgccccctcgtgcccctggacggtggccgtttcgctacttccgacttgaac
gacctgtaccgtcgcgttatcattcgcaacaaccgcctcaagcgcctgatcgaaatcaag
gctcccgaggtgattctacgcaacgagaagcgcatgctgcaggaagccgtcgactccctg
ttcgacaactcgcgcaaggtgaatgccgtgcgcgccgaaggcaaccgtgccctgaagtcg
ctgtccgacatgctgaaaggcaagcagggccgcttccgtcagaacctgctcggtaaacgt
gtcgactactcgggccgttcggttatcgtggtaggccccgagctgaagctgcacgagtgc
ggtctgcccaagaacatggcggctgagctgttcaaaccgttcatcatccgcaagctcatc
gagcgcggcatcgtgaagacggtgaagtcggccaagaaaatcgtggaccgcaaggacgcc
gtggtgtgggacatcctggagaacgtgctgaaaggccacccggtgctcctcaaccgtgct
cctacgctgcaccgcttgggtatccaggcgttccagccgcgtctcatcgagggcaaagct
atccagctgcacccgctggtgtgtactgccttcaacgctgactttgacggtgaccaaatg
gctgtgcacgttcccctgggaccggctgccgtactggaagcctcgatgctcatgctggcc
tcgcacaacatcctgaacccggccaacggcgcgcccatcgcggtgccgtcgcaggacatg
gttctgggtctgtactacgtgaccaaaggcaagcgcagcaccgacgaggagaagatcaag
ggcgaaggcatgaccttctactcggctgaggaagtggttattgccatcaacgaaggtcaa
ctctcgaagcaagcctacatcaaggtgcgcacggtggttcgcgacgaggaagataacctg
gtcacgaaaatcatcgaaacggtagctggccgtgtgctgttcaacctgcacgtaccgcag
gaagtgggcttcgtggacgaactgctcacgaagaagaagctccagcagatcatttcgctg
gtgtttaagcgcacgggcatggcccgtaccgcccagtttctcgacgacatcaagaccctc
ggcttccagtcggccttcaaaggcggcctgagcatgggtctgggtgacattcagattccg
aaggagaaggacgccctcatcgcgcaggccaaggccgacgtggatgcggtaacccagaac
taccagatgggtctgattaccgacaacgagcgttacaaccaggttatcgacatctggacg
cgcatcaacaaccagattacggagacgctcatgcgtcgtcttgaaacggacgaccagggc
ttcaactcgatctacatgatgatgcactccggtgcccgtggctcgcgcgagcagattcgt
cagctcggcggtatgcgtggtctgatggccaagccgcagaagtcgctgcagggttcggta
ggcgaaatcatcgaaaacccgattctgtctaactttaaagaaggcctggacgttatcgag
tacttcatttcgacccacggtgcccgtaagggtctggccgacaccgctctgaagacggct
gatgccggctacctgacgcgtcgtctggtagacgtgtcgcaggacgtgattgtgaacgat
gtggactgcggtacgctgcgtggcatcgagaccttcgccctgaaagacaacgaggacgtg
gtagagccgctggccgagcgtatcctgggccgcgtagcggtgcacgatatcatcgacccg
ctcacggacgaggttatcctgactgccggcgacgaaatcaccgaggaaatcacgcgccgt
atcgaccagaccagcatcgaatcggtggaaatccgctcggtactgacctgcgaagctaag
cgtggtatctgcgcccgttgctacggccgcaacctgtcgtcgggccgtatggtccagcgc
ggcgaggcggttggcgtaattgctgcgcagtccattggtgagccgggcacgcagctgacc
ctgcgtacgttccacgtaggtggtacggcttccaacattgccgttgaagccagcatccgc
gccaagttcgccggtgtcgttgagttcgaggatatccgcaccgtggataccgtgaccgac
gaaggcgtgaaaggcaaagtggtgatgggccgctcgggcgaagtacgcatcgtggagaaa
ggcaccggcaaggtgtacatctcgaaccacgtaccgtacggctcgttcctggtggttgac
gaagggcaggaagtagagaaaggcgccgaactttgcaactgggacccgtacaacgcggtt
atcctggctgaattcgacggtaccatcaactacgacggcatcaaggaaggcattacctac
cgcgaggaatcggacgaacagaccggtcaccgcgagaaggtaatcatcgagtcgaaagac
aagacattggcgccggccatcatcgtgaaagccggcaagaaaggcggcgacgaagcgcag
aaagcctacaacatccccgttggttcgcacatcagcgtggaaaatggcgagaaaatcaag
gccggtcacatcctggccaagattccacgcgccgtgggcaaaacccgcgacatcaccggt
ggtctgccccgcgtaaccgaactgttcgaagcccgcaacccgtcgaacccggccgtcgtg
tcggaaatcgacggtgtggtaacctacggcacggtgaagcgtggtaaccgcgaaatcttt
gtcgagtcgaaagacggcgtgaagaagaagtacatggtgccgctgtcgaagcacattctg
gtgcaggacaacgactttatccgcgccggtgcgccgctgtcggatggtgccattaccccg
attgacatcctgaacattcagggccccggtgccgtgcaggagtacctcgtgaacgagatt
caggaagtgtaccgcttgcagggtgtgaaaatcaacgacaaacacatcgaggtggtcgtc
cgccagatgatgcagaaagtcgtgattatcgatccgggcgacacctccttcctggagcac
caggttatcgacaaggtgaccttcatggaagaaaacgactccatcatcgacatgaaggtg
gtaacggaagaaggtgattcgacggagctgaagcgtggtcagatcgtaacggctcgtaag
ctgcgcgacgagaattcctcgctgcgccgccgcgacctgaagctggtagaagtgcgcgac
gcttcgccggccgtatcgcgtcccacgctgcaaggcatcacgcaggcttcgttgggtact
cagtcgttcatctcggccgcttccttccaggaaacaaccaaggtgctgtcggaagccgcc
atccgtggcaaggccgacgaactgctgggcctgaaggaaaacgtaattgtgggtcacctc
attccggccggtaccggtctgcgcgactaccaacgcatcatcgttggttcgaccgaagac
ccggagccggtggccgctgcgccggctgctgccgaggctcgtcctcgcgccagccgcagc
aagcgcgaagtgtcggccgagtaa
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integrated database retrieval system
