Halogeometricum borinquense: Hbor_00420
Help
Entry
Hbor_00420 CDS
T01359
Name
(GenBank) DNA mismatch repair protein, MutS family
KO
K07456
DNA mismatch repair protein MutS2
Organism
hbo
Halogeometricum borinquense
Pathway
hbo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hbo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Hbor_00420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hbo03400
]
Hbor_00420
DNA repair and recombination proteins [BR:
hbo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
Hbor_00420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
HHH_5
HHH
DUF6432
AAA
AAA_29
Motif
Other DBs
NCBI-ProteinID:
ADQ65655
UniProt:
E4NRH9
LinkDB
All DBs
Position
34227..36215
Genome browser
AA seq
662 aa
AA seq
DB search
MEFEAIPGVGEKTAEALSELDDAERALADGDVAALARAPGLTEGRAAAIARGAIRRRHDD
DGRFLATDRAREVYRDVLSLLRERTVTTYAEKRLETFFPTASASRIEEVRAFTESAMERD
PDPVVLAALEGVEPLEPASGIRVRERCLATADAERYAAAKEAFPELSVEVVEDARGLSEL
ARSYATVVALDEAFAGVDVEGDVRVRPDAAEHPDEIVPERVLAFFAQNRERIRAAADVHE
AAELDAPCDLDSLRDALSRLDDDGTIVGDEELDRLTNAVDDVDAAVSTAESVANDHLRDA
IRERDVTIEGTDFLSLVEQGARVDSLLSRELEDQYADAVATAREHLIESLSLRPEEADIA
TRVFSDDPSFPVDYDEELVSRLRAELKAGRDRRAVRLKRELAADLSALREPVGEMVSNAL
ELDVELAVSRFARDFDCVMPTITDGDTASGTGFSIEGGQSPLLDVSFEAAEPVDYGVSGV
TLLSGVNSGGKTSTLDLVALVVVLAQMGLPVPAERVELERFSELHYYAKSQGTLDAGAFE
STLRDFRELVDGESNRLVLVDELESITEPGASAKIIAGILEALDDQAATAVFVSHLADEI
REAAGFTVAVDGIEAVGLENGELVVNRSPVKDHLARSTPELIVEKLAGEDGSGFYDRLLE
KF
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atggagttcgaggctatcccgggcgtgggagagaagacggcggaagcgctgtcggaactt
gacgacgccgaacgggcgttagccgacggcgacgtggccgctcttgcccgcgcgccgggt
ctcacggagggccgcgcggcggccatcgcacgcggtgccattcgccgccgccacgacgac
gacggccggtttctcgctaccgaccgcgcccgagaggtgtatcgcgacgtcctctcgttg
ctccgcgaacgaactgtcacgacctacgccgaaaaacgactggagacgttctttccgacg
gcctcggcgtcccgaatcgaggaggtgcgcgcgttcaccgagtcggccatggagcgcgac
cccgacccggtcgttctcgcggcactagaaggagtcgaaccgctcgaacccgcctcggga
atccgcgtccgagaacggtgtctcgccaccgccgacgccgaacgctacgcggccgccaag
gaggcgtttccggaactctcagtcgaggtcgtcgaggacgcccgcggcctgtctgaactc
gcccggtcgtacgccactgtcgtcgctctcgacgaggcgtttgcgggcgtggacgtagag
ggtgacgtgcgggtccgccccgacgcggcggagcatcccgacgaaatcgttcccgagcgc
gtcctcgccttcttcgcgcagaaccgcgaacgaatccgggcggccgcggatgttcacgag
gccgcggaactcgatgcaccctgtgatctcgattcgctccgcgatgcgctctcccgactg
gacgatgacggaaccattgtcggcgacgaagaactggacaggctgacgaacgccgtagac
gatgtggacgccgccgtctcgacagccgaatccgtagcgaacgaccatctccgcgacgcc
atccgcgagcgcgacgtgaccatcgaaggaacggactttctctcgctggtcgaacagggc
gctcgcgtggactcgttgctctcgcgcgaactcgaagaccagtacgccgacgccgtcgct
acggcccgagaacaccttatcgagtctttgtcgctccgtccggaagaggccgacatcgcc
actcgcgtcttctccgacgatccgtcgttcccggtagactacgacgaagaactcgtctcg
cggctccgtgcggaactgaaagccggacgcgaccgccgagcagtccgactgaaacgcgaa
ctcgccgctgacctgtccgcactccgtgagccggtcggcgagatggtgtcgaacgcgctc
gaactcgacgtggaactggccgtctcgcggttcgcccgcgacttcgactgcgtgatgccc
accatcaccgacggcgacacggcgtcagggaccgggttctctatcgagggcggccagtca
ccacttctcgacgtttcgttcgaggcggcagaacccgttgactacggcgtctccggcgtc
acccttctctctggtgtcaactccggtgggaagacttcgacgctcgatttggtggcgctc
gtcgtcgtcctcgcacagatgggacttcccgtccccgccgaacgcgtcgaactcgaacgg
ttctctgaactgcactactacgcgaagtcacagggaacgctcgacgcaggggcgttcgaa
agcacgctccgcgacttccgtgaactcgtagacggggagtcaaaccgcctcgtcctcgtt
gacgaactggagagcatcaccgaacccggtgcctccgcgaagattatcgccggaatcctc
gaagctctcgatgatcaagcggcgacggcggtgttcgtctcgcaccttgctgatgagata
cgcgaggccgccggattcaccgtcgccgtggacgggatcgaggcagttggactggaaaac
ggcgaactcgtcgtaaaccgctcgccggtgaaagaccacctcgcgcgctcgaccccggaa
cttatcgtggagaaactcgcgggtgaggacggctctggcttctacgaccgcctcttggag
aagttttga
DBGET
integrated database retrieval system
