Halogeometricum borinquense: Hbor_01810
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Entry
Hbor_01810 CDS
T01359
Name
(GenBank) DNA helicase, Rad3
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
hbo
Halogeometricum borinquense
Pathway
hbo03022
Basal transcription factors
hbo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hbo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Hbor_01810
09124 Replication and repair
03420 Nucleotide excision repair
Hbor_01810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hbo03021
]
Hbor_01810
03036 Chromosome and associated proteins [BR:
hbo03036
]
Hbor_01810
03400 DNA repair and recombination proteins [BR:
hbo03400
]
Hbor_01810
Enzymes [BR:
hbo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
Hbor_01810
Transcription machinery [BR:
hbo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
Hbor_01810
Chromosome and associated proteins [BR:
hbo03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
Hbor_01810
DNA repair and recombination proteins [BR:
hbo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
Hbor_01810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
SLFN-g3_helicase
ATPase
nSTAND3
HBB
Zot
PhoH
AAA_16
AAA_22
AAA_30
AAA_34
AAA_19
GvpD_P-loop
AAA_11
SecA_DEAD
Asparaginase_C
AAA_25
Motif
Other DBs
NCBI-ProteinID:
ADQ65792
UniProt:
E4NSA7
LinkDB
All DBs
Position
159538..161715
Genome browser
AA seq
725 aa
AA seq
DB search
MAETSGYMRFFPYDRPYPNQGEAMDGIAEALEAERDVLVEGAPGTGKTLSALVPAVEYAR
QEDKTVVITTNVHQQMRQFVEDARAITRTEPIRAVVFKGKSSMCHIDVEYQECQTLRDTT
RSLVEKEQDKAELSEQADALVDRMRAGEQGAADARTAVTDELDTLEDELEDLREGNICEY
YYNNLTEDTDEFFSWLFDDVRTPEDIYEYADQRKLCGYELLKEGMEEVDLVVCNYHHLLD
PNIREQFFRWLNREPEDVITVFDEAHNIESAARDHASRALTENTLEQALNELEDTDDSRA
DSAENVISAFLDALKETYDEAFGFGEREQVGEDWYDLPIANNDRRDDLTLAFLDRYEGRG
ISTEVELALQLGKRLDDEYEEAYKDGEATTRQECQTLQAATFIDTWMADGGKLGQHPMCS
VRRDGGTDEVYGRAELYTCIPREVTETLFEEVHASILMSATLRPFDVTEDVLGLSDPATM
AYGLAYPEENRHTIAVQTPALFSSEREEPATQETLTQVLTDASRFTPGNTLVFFPSYAEA
ERYHERLQARMDVTDRLFLDESGTPTEEIRSKFVESQSAILLTSLWGTLAEGVSFDGDDA
RTVVVVGVPYPHLSERMEAIQDAYDRVYSSRREAGWRYAVEIPTIRKTRQALGRVIRSPD
DFGVRILADKRYTRASSEMGKYGVRSTFPPEERAEIVDVSAEKLKFAMLNFYGDHDAYDG
DPPRP
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
gtggcagagacgagcggatacatgcggttcttcccgtacgaccgcccgtacccgaaccag
ggcgaagcgatggacggcatcgcagaggccctcgaagcggaacgcgacgtactcgtcgag
ggtgcgccggggacgggcaagacgctctcggcgttggttcccgccgtagagtacgcccga
caggaagacaagacggtggtcatcacgacgaacgtccatcagcagatgcgccaatttgtc
gaagacgcgcgcgccatcacccgaacggagccgatacgcgccgtcgttttcaaggggaag
tcgtcgatgtgtcacatcgacgttgagtaccaagagtgccagacgctccgcgatacgacg
cgaagtctcgtcgagaaagagcaggacaaagcggaactgtccgagcaagccgacgcactc
gtagaccggatgcgcgcgggcgagcagggcgcagcggacgcgcggacggccgtcaccgac
gagctcgatacgctcgaagacgaactcgaagacctgcgtgagggcaacatctgcgagtac
tactacaataacctcaccgaggacacggacgagttcttttcgtggctgttcgacgacgtg
cggacccccgaggacatctacgagtacgccgaccagcggaaactgtgcggctacgagctg
ctgaaagaagggatggaagaggtggatctcgtcgtctgtaactaccaccatctgttggac
ccgaacatccgcgagcagttcttccgatggttgaaccgcgaacccgaggacgtgatcacc
gtcttcgacgaggcgcacaacatcgagtcggccgcgcgcgaccacgccagtcgggcgctg
accgagaacaccttagagcaggcgttgaacgaactcgaagacaccgacgactcccgcgcc
gactcggcggaaaacgtcatttcggcgttcctcgatgcactcaaagaaacgtacgacgag
gctttcggcttcggcgaacgcgaacaggtcggcgaggactggtacgacctaccgattgcc
aacaacgacaggcgcgacgacctgacgctcgcgtttctcgacagatacgaaggccggggg
atcagcacggaagtcgagttagcgctccagttgggcaagcgcctcgacgacgagtacgag
gaagcgtacaaagatggcgaggcgacgacgcgacaggagtgtcagaccctccaagccgcc
acgttcatcgacacgtggatggccgacggcgggaagttgggccagcatcccatgtgttcg
gttcgccgcgacggcggcaccgacgaagtgtacggtcgcgccgaactgtacacctgtatc
ccgcgggaggtgaccgagacgctgtttgaggaggtacacgcgagcatcctcatgtcggcg
acgctccggccgttcgacgtgaccgaagacgtactcgggctgtcggatccggcgacgatg
gcgtacggactggcgtatccagaagagaaccggcacacgattgccgtgcagacgcccgca
ctgttcagttccgaacgcgaggaaccagcgacccaagagacgctgacgcaggtactcacg
gatgcctcgcggttcacaccggggaacacgctcgtattcttcccgtcgtatgccgaggcg
gaacgctaccacgaacgcctgcaagcacggatggatgtaacggaccgtctgttcttagac
gaatcagggacgccgactgaagagatccggtcgaagttcgtcgagagtcagagcgcgata
ctgctcacttcgttgtggggaacgctcgcagagggtgtgagtttcgacggcgatgatgcc
agaaccgtcgtcgttgtaggcgtgccgtacccgcatctctcagagcggatggaagcgatt
caggacgcctacgacagagtgtacagcagtcggcgagaggcggggtggcgctacgccgtc
gagattccgaccatccgcaagacgcggcaggcgctcggacgcgtcatccggtcgccagac
gacttcggcgtgcgcatcctcgcggacaaacgctacacacgcgcgagttccgagatgggt
aagtacggcgtgcgttcgacgttcccgcccgaagagcgtgctgaaatcgtagacgtctcc
gcggagaagttgaagttcgccatgttgaatttctacggcgatcacgacgcctacgacggc
gatccaccccgaccctga
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integrated database retrieval system
