Halogeometricum borinquense: Hbor_04540
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Entry
Hbor_04540 CDS
T01359
Name
(GenBank) pseudouridylate synthase I
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
hbo
Halogeometricum borinquense
Brite
KEGG Orthology (KO) [BR:
hbo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hbo03016
]
Hbor_04540
Enzymes [BR:
hbo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
Hbor_04540
Transfer RNA biogenesis [BR:
hbo03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Hbor_04540
Prokaryotic type
Hbor_04540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
ADQ66057
UniProt:
E4NLG1
LinkDB
All DBs
Position
complement(428298..429116)
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AA seq
272 aa
AA seq
DB search
MRAFRIAYDGRPFYGFQRQPSVPTVEDSIFDALRSLGVLDEDARKPTGYAAAGRTDAGVS
ALAQTVAFDCPEWCTPRAMNAELPESVRAWAAADVGERFHATHDAARRAYVYDLYAPEAD
ESKAQAAADALTGEHDFHNLTPDDTGTVRDVTVSVEADGEFLVLSVAAGGFPYNLVRRLA
SIVHSVATGDRPLADIETVLGPETVPGPEGVPTAPAEPLVLERVVYPGVTFERDPEAVES
AAGVFEKRRRDGLIRTRVAGRIRRGIEGDSER
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcgctttccgtatcgcctacgacggccgaccgttttacggattccagcgacagccg
tcagtgccgacagtcgaagatagcatcttcgacgccctccggtcgctcggtgttctcgac
gaggacgcacggaaaccgaccggatacgccgccgccggccgcaccgatgccggagtgtcg
gcgctcgcacagaccgtcgcgttcgactgtccagagtggtgtacgccacgcgcgatgaac
gccgaactgcccgaaagcgtccgggcgtgggccgcagccgacgtaggtgagcgattccac
gcgacgcacgatgccgctcgtcgggcatacgtctacgacctctacgcccctgaagcggac
gagtccaaagcgcaggcggccgccgacgcgctgacgggcgaacacgacttccacaatctc
acgcccgatgacaccggcacagtccgagacgtgaccgtctccgtcgaagccgacggtgag
tttctcgtcctctcggtcgccgcgggcggattcccgtacaacctcgtccgccgtctcgcc
agcatcgtccacagcgtcgcaaccggcgaccggccgcttgccgacatcgagacggttctt
ggacccgaaacggttccgggaccggaaggcgtaccgactgctccggcagagccgctcgtc
ctcgaacgcgttgtctatcccggtgtgacgttcgaacgcgacccagaggccgtcgaaagt
gccgcaggcgtcttcgagaagcggcggcgtgacggtctcattcgcacccgggttgccgga
cgcatccgccgcggaatcgaaggcgacagcgagagatag
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