Halogeometricum borinquense: Hbor_05040
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Entry
Hbor_05040 CDS
T01359
Name
(GenBank) DNA-directed RNA polymerase, subunit E'
KO
K03049
DNA-directed RNA polymerase subunit E' [EC:
2.7.7.6
]
Organism
hbo
Halogeometricum borinquense
Pathway
hbo03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hbo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Hbor_05040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hbo03021
]
Hbor_05040
Enzymes [BR:
hbo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Hbor_05040
Transcription machinery [BR:
hbo03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
Hbor_05040
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
SHS2_Rpb7-N
Motif
Other DBs
NCBI-ProteinID:
ADQ66105
UniProt:
E4NM06
LinkDB
All DBs
Position
complement(468357..468935)
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AA seq
192 aa
AA seq
DB search
MYKRVRLKDTVEVPPEHLADVTPQRVKRLLQDKLEGRMDEDVGSVVSVVNVHDIGEGTVL
PGRAGVYYEAEFDAVTFDPDMQEVIDGEVVEVVEFGAFVGIGPVDGLLHVSQISDEYLAY
DGENQQLASTESNRTLAVGDSVRVRVVTKSIDERNPRDSKIGLTAKQPGLGKHGWLEADR
QASEATTEAEGR
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
atgtacaaacgggtacgactcaaagacacagtggaggttccgccggagcatctcgctgac
gtgaccccgcaacgggtcaagcgactcctgcaggacaaactggaaggacggatggacgaa
gatgtcggtagcgtcgtgagcgtcgttaacgttcacgacatcggcgaaggaacggttctc
cccggacgcgcaggcgtctactacgaggccgagttcgacgcggtcaccttcgatcccgac
atgcaggaggtcatcgacggagaggtcgtcgaggtcgtggagttcggtgccttcgtcggc
atcggtcccgtggacggactgctgcacgtctcgcagatttccgacgaatacctcgcctac
gacggcgagaaccagcaactcgcctcgacggaatcgaaccgcacgctcgcagtcggagac
tccgtgcgcgttcgcgtcgtcacgaagagcatcgacgagcgcaacccgcgcgactcgaag
attggcctcaccgccaaacagcccggcctcggcaaacacggctggcttgaagcggatcga
caggccagcgaagcgacgaccgaagcggagggccggtag
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