Halogeometricum borinquense: Hbor_10090
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Entry
Hbor_10090 CDS
T01359
Name
(GenBank) translation elongation factor 1A GTP binding domain family
KO
K03231
elongation factor 1-alpha
Organism
hbo
Halogeometricum borinquense
Pathway
hbo03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
hbo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
Hbor_10090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hbo03019
]
Hbor_10090
03016 Transfer RNA biogenesis [BR:
hbo03016
]
Hbor_10090
03012 Translation factors [BR:
hbo03012
]
Hbor_10090
04131 Membrane trafficking [BR:
hbo04131
]
Hbor_10090
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hbo04147
]
Hbor_10090
Messenger RNA biogenesis [BR:
hbo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
Hbor_10090
Transfer RNA biogenesis [BR:
hbo03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
Hbor_10090
Translation factors [BR:
hbo03012
]
Eukaryotic type
Elongation factors
Hbor_10090
Membrane trafficking [BR:
hbo04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
Hbor_10090
Exosome [BR:
hbo04147
]
Exosomal proteins
Proteins found in most exosomes
Hbor_10090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP_EFTU_D2
GTP_EFTU_D3
GTP-eEF1A_C
ATP_bind_1
EF-G_D2
Motif
Other DBs
NCBI-ProteinID:
ADQ66603
UniProt:
E4NPX0
LinkDB
All DBs
Position
943851..945464
Genome browser
AA seq
537 aa
AA seq
DB search
MSADRAVLHEALERGEEEGGNIEFKERLSRSVHLADGRLESLAAQLRHRVLSGDGTATYV
VGVTDDGGIAGISPDAFSESMDVLSILADEAGAHIEDVETWGVGEASSNGLVGVATVKEG
TALDADDDHIVVGTAGHVDHGKSTLVGSLVTGQADNGEGGTRGFLDVQPHEVERGLSADL
SYAVYGFDDDGPIHLHNPHRKSDRARVVQESDRLVSFVDTVGHEPWLRTTIRGLVGQRLD
YGLLVVAADDGPTRTTREHLGILLAMELPTVVALTKTDAVSDERVLEVEREVERLLRDVE
RTPLPVERHGVEAAVEEISSAVVPVVQTSAVTMDGLDELDSFFQRLPKTTSEAREDFRMY
IDRTYSVTGVGAVASGTVNSGSVEAGDELLVGPMADGSFRQVEVRSIEMHYHRVDRAKSG
RIVGIALKGVKESEIERGMVLLPADADPTPVRSFEADVMVLNHPTRIRDGYEPVVHLETV
SEAVVFHPDGGQLLPGDTGHATVEFKFRPYLVEKGQRFVFREGSSKGVGTVTEIHEG
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgagcgctgatcgggccgtcttgcacgaggcccttgagcgcggcgaagaggaaggcgga
aatatcgagttcaaagaacgactctcccgctcggtccacctcgcagacggccgattggag
agtctcgccgctcaactccgacaccgagtgctatccggcgacgggacagcgacgtacgtc
gtcggcgtcacagacgatggtggtatcgcgggtatctctcccgacgcattctccgagtcg
atggacgtgctttccatcctcgctgacgaagccggagcgcacatcgaagacgtagagaca
tggggcgtcggagaggcctcatctaacggtctcgtcggcgtcgccacggtgaaagaggga
accgccctcgatgcggacgacgatcacatcgtcgtcggcacggcgggtcacgtagaccac
ggtaaatcgacgcttgtcggttcactcgtcacgggacaggccgacaacggagagggcgga
acgcgcggcttcctcgatgtccaaccgcacgaagtcgaacgcggtctctccgcggacctc
tcgtacgccgtctacggcttcgacgacgacggtcccatccacctgcacaatccacaccga
aagtccgaccgtgcccgcgtcgtccaagagtcggaccgactcgtttcgttcgtcgatacc
gtcggccacgaaccgtggcttcgcaccacgattcgcggactcgtcggccaacgcctcgac
tacggccttctcgtcgtcgcggcggacgacggccccacgaggacgacgcgcgaacacctc
ggcatcctgttggcgatggaactgccgactgtcgtcgccctaacgaagacggacgccgtg
agcgacgagcgcgttctggaggtcgaacgtgaagtcgaacgcctcctgcgcgatgtcgag
cgaacgccgcttcccgtcgaacgccacggcgtcgaagcggccgtcgaggagatcagttcc
gctgtggttcccgtcgttcagacgagcgcggtgacgatggacggtctcgacgagttggac
tcgttcttccagcgactgccgaagaccacctcggaagcccgtgaggacttccggatgtac
atcgaccggacgtactcggtgaccggcgtcggcgcagttgcctccggaaccgtcaactcc
ggaagcgtcgaggcaggcgacgaactactcgtcggtcccatggcggacgggtcgttccgc
caagtggaggtgcgctctatcgagatgcactaccaccgcgtggatcgagcgaaatcgggt
cgtatcgtcggcatcgccctgaaaggtgtgaaggaatcggagatcgaacgcggaatggtg
ttgttgcctgctgacgccgatccgacgccagttcggtcgttcgaggcggacgtgatggtg
ttgaaccatccgacgcgcatccgtgacggttacgaaccggtcgtccacctcgaaaccgtg
agcgaagccgtcgtcttccatcccgacggcgggcaactgcttcccggcgacaccggccac
gcgacggtggagttcaagttccgtccgtatctcgtcgagaagggacaacggttcgtcttc
cgcgagggaagttcgaaaggcgtcgggaccgtcaccgagattcacgagggctga
DBGET
integrated database retrieval system
