KEGG   Halogeometricum borinquense: Hbor_12340
Entry
Hbor_12340        CDS       T01359                                 
Name
(GenBank) ATP dependent helicase, Lhr family
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
hbo  Halogeometricum borinquense
Brite
KEGG Orthology (KO) [BR:hbo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hbo03400]
    Hbor_12340
Enzymes [BR:hbo01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Hbor_12340
    5.6.2.6  RNA 3'-5' helicase
     Hbor_12340
DNA repair and recombination proteins [BR:hbo03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    Hbor_12340
SSDB
Motif
Pfam: DEAD_assoc DEAD WHD_Lhr Helicase_C ResIII Cas3-like_C_2 Ribonuclease AAA_19 CvfB_2nd DUF5312
Other DBs
NCBI-ProteinID: ADQ66823
UniProt: E4NR87
LinkDB
Position
1142106..1144871
AA seq 921 aa
MSSRGRRLLCEAAERATDPFDFDPQTVSLADENVLARLEPSVREWWVDQFGRYVDGNGGF
FTPPQREAVPLIDDSENALICAPTGSGKTLASFTAIINDLFRRDRELADGLENSVYCLYI
SPLKSLANDIHRNLTQPLEGITERMDERGETVTLRHAIRHGDTDSTDRQKMLETTPHILN
TTPETLSILLNSPKFKEKLRTVEYVIVDEIHSLAENKRGTHLSVSLERLENLCHDSPTRI
GCSATVEPLSTMAEFLVGRGDDGDPREYELVDTRFVRDFDLQLECPTDDLINTPRNVVQE
RFYDRLDELVQSHTNTLVFTNTRSGAERVLHNLRENYDGYDEQNSGCHHGSLSKERRQEI
ERELKDGNLDVVTTSTSLELGIDMPHIDLVVQVGSPKSVASLLQRVGRAGHRLGQTVEGR
VIALDRDELVECAVMLRKAEDGFVDRVFVPENAQDVAAQHVYGMAINRVWREEEILQTLR
RAYPYRNFSDAEWEQLMAYLTADYEGLEDKNVYAKVWRDTNDAPDGEHHYEEYDVGEPLV
GKRGRMARVIYMTNIGTIPDSFTCDVMTRSGDEWVGQLDENYLDTIDSGDVFVLGGEHFE
YRYRRGSKVYVDRTSKRPTVPSWFSERLPLSYDLGREITRFQGELLGRLDDGGPPAVRTW
LRAFPVDENSVRAITRMFDEQVRYAGSESVATESRIAIEEQLDRDEYQRRFYVHSNYGRR
FNDGLSRLIAFHFARRSNANVQVAVADNGFSISMPLNRKVDVEAVIRDIDPDSVDEDLRA
ALDGTDLLKRYFRINATRALMILKRYKGYEKSAAQQQVSSEMLLSFAQDLDGFAVMEETY
REILEDKLNVAAVKDVLRGVKSGDVEVVARNVDSPTPRAFGLATLMASDVVLAEDESQAL
KAFHARVLDEIGDDEAVPVDD
NT seq 2766 nt   +upstreamnt  +downstreamnt
atgagtagccgtggtcggcgacttctctgcgaggcggcggagcgagcgactgacccgttc
gacttcgacccgcagacggtgtcactcgctgacgaaaacgtccttgcgcgactcgaaccg
tccgtccgcgagtggtgggtcgatcagttcggacgctacgtagacggcaacggcggcttc
ttcactccgccgcagcgcgaagcggtccccctcatcgacgactcggaaaacgccctcatc
tgtgcgcccacggggtccggaaagacgcttgcctcctttaccgccatcattaacgacctg
ttccgacgcgacagggagttagcagacggtctcgaaaactcggtgtactgtctgtacatc
tcgccgctgaagtctctggccaacgacatccatcgcaaccttacacaaccgcttgaggga
atcaccgagaggatggacgaacgcggcgagacggtcactctccggcacgcaatccgccac
ggcgacaccgacagtaccgaccggcagaagatgctggagacgacgccgcacatcctcaac
acgacgcccgagacgctttcgattctcctcaactcgccgaagttcaaggagaaacttcgg
accgtcgagtacgtcatcgtagacgagatacacagtctcgcggagaacaaacgcggcacg
catctctccgtctcgttggagcgtctggagaatctgtgtcacgattcaccgactcgaatc
ggctgttcggcgacggtcgaaccgctctcgacgatggccgaatttctcgtaggacgcggc
gacgacggcgacccccgcgagtatgaactcgtggacacgcggttcgtccgcgacttcgac
ctgcagttggagtgtccaacagacgacctcatcaacacgccccggaacgtcgttcaagag
cggttctacgaccgactggacgagttggtgcagtcgcacacgaacacactcgtcttcacc
aacacccggtcgggcgcagaacgcgttctccacaacctcagggagaactacgacggctac
gacgagcagaactccgggtgccaccacgggagtctgtccaaagagcgcagacaggagatc
gaacgcgagctaaaagacggaaatctggacgtagtgacgacctcgaccagcctcgaactc
ggcatcgacatgccgcacatcgacctcgtggtacaggtggggtcgccgaaatcagtcgct
tcgttgctccaacgcgtcgggcgcgcgggtcaccgactcggacagaccgtcgaggggcgc
gtcatcgccctcgatagagacgagttagtcgagtgcgcagtgatgctgcggaaggccgaa
gacggattcgttgaccgggtgttcgtccctgaaaacgcccaagatgtcgccgctcagcac
gtctacgggatggccatcaaccgggtgtggcgcgaggaggagatactgcagacgctccgg
cgtgcgtacccgtaccggaacttctccgacgccgagtgggagcaactgatggcgtatctc
acggccgactacgagggactggaggacaagaacgtctacgcgaaggtatggcgcgacacg
aacgacgcgcccgacggcgaacaccattacgaggagtacgacgtgggcgaaccgctcgtc
ggtaagcgcgggcggatggctcgcgtcatctacatgacgaacatcggcaccatccccgac
tcgttcacctgcgacgtgatgacccggtcgggcgacgagtgggtcggccaactggacgag
aactacctcgacaccatcgactccggtgacgtgttcgtcctcggtggcgaacatttcgag
taccgctaccgacgcgggtcgaaggtgtacgtggacagaacgagcaagcggccaacggtt
ccctcgtggttctccgagcgcttgcccctctcgtacgatttgggccgagagataacgcga
tttcaaggcgaactcctcggcagattagacgacggcggtccgccggccgtacggacgtgg
ctccgtgcgtttccggtggacgaaaacagcgtccgtgccatcactcggatgttcgacgag
caggtgcgctacgccggttccgagagcgttgcaaccgagtcgcgcattgccatcgaggag
caactcgacagagacgagtaccaacggcgcttctacgtccactcgaactacggccggcgg
ttcaacgacggtctctcgcgcctcatcgcctttcatttcgcgcggcggtcgaacgcgaac
gtgcaggtggccgtcgcggacaacgggttctccatctcgatgccgctgaaccggaaagtg
gacgtagaggccgtcatccgcgacatcgaccccgactcggttgacgaggatctgcgggcc
gcactcgacggcacggacctcctgaagcggtacttccgtatcaatgccacccgcgcgctg
atgatactgaagcgctacaaggggtacgaaaagtccgcggcccaacaacaggtgtcctcg
gagatgctcctgtcgttcgcgcaggatctcgacggcttcgccgtgatggaggagacgtac
cgagagattctggaggacaaactgaacgtggccgcggtcaaagacgtacttcggggcgtc
aagtcgggcgacgtggaagtcgtcgcacgcaacgtggactcaccgacgccgcgtgcgttc
ggtctcgccacgctcatggccagcgacgtggttctcgcagaagacgagagtcaagccctc
aaagcgttccacgcccgcgtcttagacgaaatcggtgacgacgaggccgtgccagtggac
gactaa

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