Halogeometricum borinquense: Hbor_12540
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Entry
Hbor_12540 CDS
T01359
Name
(GenBank) DNA-directed RNA polymerase, subunit D
KO
K03047
DNA-directed RNA polymerase subunit D [EC:
2.7.7.6
]
Organism
hbo
Halogeometricum borinquense
Pathway
hbo03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hbo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Hbor_12540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hbo03021
]
Hbor_12540
Enzymes [BR:
hbo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Hbor_12540
Transcription machinery [BR:
hbo03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
Hbor_12540
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
GFO_IDH_MocA_C
Thioredoxin_14
Motif
Other DBs
NCBI-ProteinID:
ADQ66842
UniProt:
E4NRQ5
LinkDB
All DBs
Position
complement(1159274..1160056)
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AA seq
260 aa
AA seq
DB search
MAEDFEVEFIERDDRKARFLVRGMTPAVANGIRRAMIADVPTFSIDTVRFVENSSVMFDE
MIGLRLGLVPLTTPLDDFEQGDTVTLALDVEGPATAYSGDIETSDELVKPAEDNVPIIEL
KQGQRLELEADAVLGDGKSHAKHQGGVAVGYRHLHRVEVVGDANEFEEQEPNILRGVIEE
QAAEHAADESAEDGELVPTSEFDNDLTKRYPGKEVEVHDVPGAFVFHVETDGSFTVPELV
RRAVESISDRAAELEEKVAI
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagatttcgaggtcgagttcatcgaacgcgacgaccgaaaggctcgcttcctc
gttcgcgggatgaccccggcagtcgccaacggcatccggcgagcgatgatcgctgacgtg
ccgacgttcagtatcgacaccgtacggttcgtcgagaactcgtcggtgatgttcgacgag
atgatcggtctccgcctcggcctcgttccgctcacgacgccgctcgacgacttcgagcag
ggcgacaccgtgacacttgcactcgacgtggaaggtccggcaacagcctactccggagat
atcgagacgtctgacgaactcgtcaaacccgcagaggacaacgtgcccatcatcgaactg
aagcagggccaacgcctcgaacttgaggctgacgccgtcctcggtgacgggaagtcccac
gcgaagcaccaaggtggtgtggctgtcggctaccgacatctccaccgcgtggaggtcgtt
ggtgacgccaacgagttcgaagagcaggaaccgaacattctccgaggggtcatcgaagag
caggcggccgaacacgccgccgacgagagcgccgaagacggcgaactcgtccccacgtca
gagttcgacaacgacctcacgaagcgataccccggcaaggaagtcgaggtacacgacgtg
cccggcgcgttcgtcttccacgtggagacggacgggtcgttcaccgtcccggaactggtc
cgtcgcgcagtcgagagtatctctgaccgcgcggccgaactcgaagagaaagtagcgata
tag
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integrated database retrieval system
