Halogeometricum borinquense: Hbor_13120
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Entry
Hbor_13120 CDS
T01359
Name
(GenBank) DNA repair exonuclease
KO
K03547
DNA repair protein SbcD/Mre11
Organism
hbo
Halogeometricum borinquense
Brite
KEGG Orthology (KO) [BR:
hbo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hbo03400
]
Hbor_13120
DNA repair and recombination proteins [BR:
hbo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Hbor_13120
Archaeal homologous recombinant proteins
Hbor_13120
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
Metallophos_2
Toprim_3
DUF1317
DUF604
Motif
Other DBs
NCBI-ProteinID:
ADQ66895
UniProt:
E4NRV8
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Position
complement(1224542..1225828)
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AA seq
428 aa
AA seq
DB search
MASVEVLCVADIHIGRRPSRLPDRFDPADFSPRTIWANLAESAVTQGVDAVVVAGDLVDQ
ENRYAEAFGAVESVATRLAEAGIPLIAVAGNHDADVLPDLAEAIEHLQLLGRDGSWERTA
LTDADGEPCLHVDGWSFPGRYYHENPLDAYDLVDEGVPRLGVVHADVSGEDRYAPVAVDD
LATSGHSAWVLGHLHVPGLRHENPPVLYPGSLQPLDPSETSGHGAWLVSVESDGTVETEP
LRSATLQYEEVVVSTEPDHGFHDVVDATHEQLRETATKCGSETELLAVTVTVAGRTDADT
DLRSRRGELEQIELTDGGTAVRVLDVTVDTKPSIELAERAGDDDPVGYLAGLLRALDDDE
PLDPYRDVIEAAHTSVRETHDSNAYRELKSHDETYTRPTEAETKEVLRRQARQLVDVFVE
QQGVPADE
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atggcatcagtagaggttctgtgtgtagcagatattcatattgggcgtcgtccaagccgg
ctccctgaccggttcgatccggccgatttttctccccgtacaatctgggctaatctcgcg
gagtcggctgttactcagggagttgatgcggtcgtcgttgcgggtgacctggttgaccag
gagaaccggtatgcggaagcgttcggtgccgttgagtccgtggcgaccagacttgcagag
gctggtattcccctcattgctgtcgctgggaaccacgacgccgacgtactcccggacttg
gctgaggcaatcgagcatctgcagttgctcggtcgggatgggtcgtgggagcgaacagcc
ttgaccgacgccgatggtgagccgtgccttcacgtggacgggtggtcgttccctggccgg
tactaccacgagaatccgttggatgcgtatgatttggttgatgagggcgttccgcgtctc
ggcgtcgtccacgcagacgttagtggggaggatcggtacgccccggtcgctgtggatgac
ttggcgacgagtgggcattcggcgtgggttcttggccacctccacgttccagggctccgt
cacgagaacccgccagttctctatccggggtcgcttcaaccgttggatccgagtgagact
agcggtcacggtgcgtggcttgtctcggtcgagagcgatgggacagtagagacggagccg
ctgaggtcggcgacactgcagtacgaggaggtcgttgtctcgacggaacctgaccacgga
ttccacgacgtcgtcgatgctactcacgagcagttacgtgagacagccacgaagtgcggc
tccgaaaccgagctccttgcggtcaccgtaacggttgcaggacgaacggatgcggacact
gatctgcgcagccgacgcggggagcttgaacagattgagctcacggacggcgggacggca
gtgcgtgttctcgacgtgactgtcgatacgaaaccgtcgattgagctcgctgaacgcgct
ggcgacgatgacccggtcggatacttggccgggttgctgcgtgcccttgacgatgacgaa
ccgctggatccgtaccgggacgtcatagaggctgctcatacgagtgtccgcgagacccac
gactcgaatgcgtatcgggagctcaagagccacgacgagacgtacactcgcccgacggaa
gctgaaacgaaggaagtactccggcgacaagctcggcaactcgtcgacgtgttcgttgag
cagcagggggtgcccgcagatgagtga
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