Halogeometricum borinquense: Hbor_15330
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Entry
Hbor_15330 CDS
T01359
Name
(GenBank) 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
hbo
Halogeometricum borinquense
Pathway
hbo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hbo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Hbor_15330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hbo03400
]
Hbor_15330
Enzymes [BR:
hbo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Hbor_15330
DNA repair and recombination proteins [BR:
hbo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Hbor_15330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
OGG_N
Motif
Other DBs
NCBI-ProteinID:
ADQ67105
UniProt:
E4NTQ3
LinkDB
All DBs
Position
1457104..1458024
Genome browser
AA seq
306 aa
AA seq
DB search
MEFETGAIPLSDIDGAFDLQATLESGQSYLWDRADGRMYESMDVYGGDAWYETVVPPIDG
VSDEQAVVRVRQTDGRLEWEATTDAVPILTHLLRLDDDLDAILDATPDDSLLERAYDAYE
GMRLVRDPPFPCLISFICSAQMRVSRIHGMQMRLAREYGDTVTVAGETYHAFPTADQLAV
RTEDELRDLSLGYRAPYVQRTAEMVANGDAHPNDAVGLPYEDARDSLTQFVGVGDKVSDC
VLLFSLGFLEAVPLDTWIQTAIADHYPDCEAGNYTETSRAIRDRLGGQYAGYAQTYVFYY
LRAGGE
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atggagttcgaaaccggcgcgattccgctgtcggatatcgacggggcgttcgacctacag
gcgacgctcgaaagcggacagtcgtacctctgggaccgcgctgacggccggatgtacgag
tcgatggacgtgtacggcggcgatgcgtggtacgagacagtcgtccctcccatcgacggc
gtttcggacgaacaggccgtagtgcgcgtccgacagacggacggccgtctggagtgggag
gcgacgaccgacgcggtgccgattctgacgcacctgctccgtctggacgacgatttggat
gcgattctggacgcgacgcccgacgactcgctactggaacgcgcgtacgacgcctacgag
ggaatgcgtctcgtgcgcgacccaccgttcccctgtctgatctcgttcatctgttcggca
cagatgcgcgtctcacgtattcacgggatgcagatgcgcctcgcgcgagagtacggtgat
accgtcaccgttgcgggtgagacgtaccacgcctttccgacagccgatcagttggccgtc
cgaaccgaggacgaactgcgcgacctgagcctcggataccgcgccccctacgttcaacga
acggctgagatggttgcaaacggcgatgcgcacccgaacgatgcggtgggactgccgtac
gaggacgcgcgcgactcgctcacgcagtttgtcggtgtgggcgacaaagtctccgactgc
gtgctgttgttctcgcttggctttctggaggccgttccgttggacacgtggattcagacc
gccattgcggaccactacccggactgtgaggccgggaactacacggagacatcgcgcgcc
atccgtgaccgtctcggcggccagtacgccggatacgcgcagacgtacgtgttctactat
ctccgcgcgggcggcgagtga
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