Halogeometricum borinquense: Hbor_20670
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Entry
Hbor_20670 CDS
T01359
Name
(GenBank) Transcription factor IIE (TFIIE), alpha subunit
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
hbo
Halogeometricum borinquense
Pathway
hbo03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hbo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Hbor_20670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hbo03021
]
Hbor_20670
Transcription machinery [BR:
hbo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
Hbor_20670
Prokaryotic type
Archaeal type
TFE
Hbor_20670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
Sigma70_r3
Motif
Other DBs
NCBI-ProteinID:
ADQ67633
UniProt:
E4NP92
LinkDB
All DBs
Position
complement(1978028..1978552)
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AA seq
174 aa
AA seq
DB search
MAFEGLLNDPVIQKYLHELVGPTGMPVAAAPPDGEVTDEELAEELGLELNDVRRALFILY
ENDLASYRRVRDEDSGWLTYLWTFHYENIPENLEEEMYRLLDALEERLEYERTHEFYLSE
PAGIRFEFSEAMELGFQCPETGAPLEPMENDDMVDAMERRIEELRDELNVEATN
NT seq
525 nt
NT seq
+upstream
nt +downstream
nt
atggcttttgaagggctgctgaacgaccctgtcatccagaagtacctccacgaactggtt
ggaccgacggggatgccggttgcggccgcgccgccggacggcgaggtcaccgacgaagag
ttggccgaggagttgggcctcgaactgaacgacgttcgccgggcgctcttcatcctctat
gagaacgacctcgcatcgtaccgtcgtgtccgcgacgaagattcggggtggcttacctac
ctctggacgttccactacgagaacatcccggagaacctcgaagaggagatgtaccgtctc
ctcgacgcgctcgaagaacggttggagtacgaacggacccacgagttctatctttcggaa
cccgcgggcatccgctttgagttctccgaggcgatggaactcggcttccaatgccccgag
actggtgcacccctcgaaccgatggagaacgacgatatggttgacgccatggaacggcgc
atcgaggagttgcgcgacgaactcaacgtcgaggcgacgaactga
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