Halogeometricum borinquense: Hbor_22340
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Entry
Hbor_22340 CDS
T01359
Name
(GenBank) Transcription initiation factor IIB (TFIIB)
KO
K03124
transcription initiation factor TFIIB
Organism
hbo
Halogeometricum borinquense
Pathway
hbo03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hbo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Hbor_22340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hbo03021
]
Hbor_22340
Transcription machinery [BR:
hbo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
Hbor_22340
Prokaryotic type
Archaeal type
TFB
Hbor_22340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Sigma70_r4
Zn_ribbon_3
Zn_ribbon_PaaD
Cyclin_N
Zn_ribbon_tTFIIB
Trm112p
HTH_Tnp_ISL3
DZR_2
Zn_ribbon_LysW
Zn_ribbon_8
Motif
Other DBs
NCBI-ProteinID:
ADQ67795
UniProt:
E4NQC2
LinkDB
All DBs
Position
complement(2133292..2134275)
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AA seq
327 aa
AA seq
DB search
MTDRIRSSEMESARARESDREAEKTGDEETLCPECGSSNLTTDAEHGETVCDDCGLVVEE
DEIDRGPEWRAFDAREKDQKSRVGAPTTNMMHDRGLSTNIGWQNKDAYGNSLSSTQRQKM
QRLRTWNERFRTRDAKERNLKQALGEIDRMASALGLPENVRETASVIYRRALDDDLLPGR
SIEGVATSALYAAARQAGTPRSLDELETVSRVDKDEISRTYRYVVRELNLEIEPADPEQY
VPRFASELGLNDESERHARQLLRTAKEQGIHSGKSPVGLAAAAIYAASLLANEKVTQSEV
SEVANISEVTIRNRYHELLEAEEQLMT
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgacagatcgcatccgaagttcggagatggagagcgcacgcgcgcgcgagagtgaccga
gaggctgaaaaaacgggcgacgaggagacactttgcccggagtgtggctcctcgaacctc
acaacggatgcggaacacggcgagacagtgtgtgatgactgtggactcgtcgtcgaggaa
gacgaaatcgaccgcgggccggagtggcgcgcgttcgacgcgagggaaaaagaccagaag
tcccgcgtcggtgcgccgacgacgaacatgatgcacgataggggactttcgaccaacatc
ggctggcagaacaaagacgcctacggcaactccctgtcgtcgacccaacgtcagaagatg
caacgactgcggacgtggaacgagcgcttccgcacccgcgatgccaaagagcggaaccta
aagcaggcgctcggcgaaatcgaccggatggcttcggcgctcggcctccccgagaacgtc
cgcgagacggcctcggtcatctaccgccgtgcgctggatgacgacctcctccccggacgc
tccatcgagggcgtcgctacctccgcactctacgctgcggcgcgacaggccggtaccccc
cgctcgctcgacgagttggagaccgtctctcgcgtcgataaagacgagatttcgcggacg
taccgctacgtcgtccgcgaactgaatctcgaaatcgaaccggcagatcccgaacagtac
gttccgcggttcgcctccgaactcggcctgaacgacgagtccgaacggcacgcccggcag
ttactgcggacggctaaagaacaaggcattcactccgggaagtcacccgtcggtctcgcg
gccgccgcaatctacgccgcctcgttgctcgccaacgaaaaggtgacgcagagtgaggta
agcgaggtcgctaacatctcggaagtgaccatccgaaaccggtatcacgaactgctcgaa
gccgaagagcagttgatgacgtaa
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integrated database retrieval system
