Halogeometricum borinquense: Hbor_23440
Help
Entry
Hbor_23440 CDS
T01359
Name
(GenBank) PAS domain S-box
Organism
hbo
Halogeometricum borinquense
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_3
PAS
PAS_4
PAS_9
HATPase_c
PAS_8
HATPase_c_2
Diguanyl_cycl_sensor
HATPase_c_3
HATPase_c_5
HisKA
Motif
Other DBs
NCBI-ProteinID:
ADQ67904
UniProt:
E4NQV7
LinkDB
All DBs
Position
complement(2240596..2242725)
Genome browser
AA seq
709 aa
AA seq
DB search
MVDQSLDSYRLELALENLGAVLWEWDPETDTAVTHPSADGFFGRDISSFDELSEIIHPED
REQVVETLESSLETGASFNIEFRILVDDEVQVIETRGSIRREPEMGSPRVVGIATDITER
KRRETEFQTIVEQSSDVIAVVDDTGVIEYVSPAVRRVFGYETDEILGANISDLIYPPDRD
DALPVLLGSGMTDKNSPERVEYRLRHGDGSVRWVESRVSPRGDAMSSNLVINTRDITERV
EVEQNLKRADESRSLALEASQAGIWDWEIGSERVNWHSSCERVFRVPEGGFEGTYEAFAR
RVHDDDLPAVEAAINRTVNEGEPYHVDYRIIRDDGVERWITARGKVLSDSSGNPTRLLGV
VIDITEQKEREQELKQYERIVETAPDPIYVLDETGDFTLVNEALAAAVGCSKEELIGTSI
GDQLESADAEESLQRIMALSDEESDSPPLDLTLSTPDGTRDYEVNIALSGDDQRGDAPRT
VGVARDVTDIKEHKRRLSVMDRVLRHNIRNKLNIILAHSNFLTEYPDQDIQNRAETILEA
GESLESLSESARRFKASTHPNQSSIRTTNVADCVTHVVDEAQRQFPHATIRVHQEAEVWA
EVHEAFELALTELVENAIRHSDRSAPTVEITVEKHESTVSVQVSDDGPGLTDMEQNVVLE
GEETALEHGSGLGLWLVRWTIANSGGTIDVRNNDPTGTVVEARVPRDSS
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atggtggaccaatcgctcgattcctatcggttggaactcgccttagaaaatttaggggcg
gtactttgggagtgggaccctgagacagataccgcggttactcacccatcggcagatgga
ttcttcggtcgtgatatctcttcgtttgacgaattatctgagataatccatcctgaagac
cgcgagcaagttgtcgaaacactcgaatcgagcctggaaacgggagcatcattcaatatt
gagttccgcatactggtcgatgatgaggttcaagtgatcgagacgcgggggagtatccgc
cgggaaccggagatgggatcacctcgcgtggtggggattgcgacggatatcacagagcga
aaacgccgagagacggagtttcaaacgattgttgaacagtcgtcagacgtcatcgcagtt
gtagacgatactggcgttatcgagtatgtgagcccagctgttcgtcgagtgtttgggtac
gagacggacgagatacttggagctaacatctcggacctgatctatccgccggaccgtgac
gatgctctcccagtacttctgggcagtggaatgacggacaagaattcacccgagcgagtt
gagtacagactccgccatggcgatggctcggttcggtgggttgagtcacgtgtctccccg
aggggtgatgcaatgagtagtaatctcgttattaacacccgcgatattacggagcgagtt
gaggttgaacagaacctcaagcgtgctgacgagagtcggtcactcgcactggaagcgtcg
caggcaggaatctgggactgggagatcgggagtgaacgtgtcaattggcactcatcctgt
gaacgggtcttcagggtgccagaaggtgggttcgaggggacgtacgaggcgttcgctcgg
cgcgtccacgatgacgatttaccagccgttgaagcggccattaaccgcaccgtcaacgaa
ggcgaaccataccatgtcgattaccggatcattcgggacgacggtgtcgaacgctggatc
accgctcgcggaaaggtactgtcagactcgtcaggaaacccgacccgactcctcggtgtt
gttatcgatatcactgaacagaaagaacgcgaacaggaactcaagcagtacgagcgaatc
gttgagacagcgccggatcccatttacgtactcgacgagactggtgatttcacactagtg
aatgaggcactcgcggcggcggtagggtgttcgaaagaggaacttatcggtaccagcatc
ggagaccaattagagtcagcggatgctgaggagagtctacagcgtattatggcgctctcc
gacgaagaatccgactcacctccacttgacctcactctttcgactccggatggaacccga
gactacgaagtgaacatcgctctgagcggggacgaccagagaggcgatgcaccaagaacg
gtcggcgtggcccgagatgtcaccgacatcaaagaacacaaacgccggttatcagtaatg
gaccgcgtgcttcggcacaacattcgaaataagctcaacatcatcttggcacatagcaat
tttctcacagagtacccggaccaagatatccagaaccgcgccgagacgatacttgaggcc
ggtgaatccctcgaatcactcagtgagagtgcccgccggttcaaagccagcactcacccc
aatcaatcgagcattcgtacgactaacgttgccgactgtgtcacccacgttgtcgatgaa
gcacaacgccaatttccccatgcgacgattcgggtacatcaggaagcggaggtgtgggcg
gaggttcacgaggcgtttgaactagcactcactgaactcgtcgagaatgcgatccgccat
tcagatcgctctgcccccactgtcgagataaccgtcgagaagcacgagtcaacagtttca
gtgcaggtgagtgacgatggaccggggctgaccgacatggagcaaaatgtcgtccttgaa
ggagaagaaactgctcttgagcatgggtcgggactcggactatggctcgtccgatggacg
attgccaacagtggcgggacaattgacgttcggaacaacgacccaacggggacggttgtc
gaggctcgggtaccacgggattcgtcttag
DBGET
integrated database retrieval system
