Halogeometricum borinquense: Hbor_23650
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Entry
Hbor_23650 CDS
T01359
Name
(GenBank) ATPase involved in DNA repair
KO
K03546
DNA repair protein SbcC/Rad50
Organism
hbo
Halogeometricum borinquense
Brite
KEGG Orthology (KO) [BR:
hbo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hbo03400
]
Hbor_23650
DNA repair and recombination proteins [BR:
hbo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Hbor_23650
Archaeal homologous recombinant proteins
Hbor_23650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
AAA_15
DUF3584
AAA_13
AAA_21
AAA_29
Syntaxin-6_N
ATG14
NPV_P10
DUF1664
FapA
Snapin_Pallidin
CENP-F_leu_zip
ABC_tran
AAA_16
TPR_MLP1_2
ATG16
DUF4201
TMF_TATA_bd
Motif
Other DBs
NCBI-ProteinID:
ADQ67924
UniProt:
E4NQX7
LinkDB
All DBs
Position
complement(2266783..2269467)
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AA seq
894 aa
AA seq
DB search
MRFDRIRLQNFKPYAETDLDLTDGVTVIHGLNGSGKSSLLEACFFALYGARALDENLEDV
MTTGTEEAEIELWFTHDGGSYHIHRRLRKSGDRVQTAKCLLEGPDVSVDGARDVRGFVAD
LLRMDAEAFVNCAYVRQGEVNKLINATPSQRQDTIDDLLQLGKLEEYRVRAGKARLGVED
VLTERRGALSKVESQIEAKEDAGLHERLNALETELGEVDDQIERYEDQREKAVETRENAE
EVLETYREKRAELDELAEDIADLRETIESDERKRETLRSEVGEARDSVEEIRDRIEKKRA
ETTLDEVTSDAIAARRDELDEREAEIRSDLTDVRERRTMLSNQAKKLRERAEEFESRAAE
KRSRADELDDDAEDAEEELEQRSARLEELEAELESLTAEFEDAPVELGEAASHRDEVRET
LTDVRAELTETNAEGENVRDRLTEARELRDEGKCPECGQPVEDSPHVDSIGEYEARIEEL
EATLSDLRERRETLNSRLERAESLVETENRIGELRNSRELFEQRIEDARETVEERRTEAE
TLREAADKLEAEADEKRTAATTQAEAAEDAAETVEGLESDLESVAEAESRLDTLSDLRSK
LTETESEIERLEERRESIAELNDERRERLAEKRDRRSELADEVDESTVEEAKAKKEKAEN
YLEQVDEELATLREKRDSLQSDIGGVNGELEQLEALREDRDELAARVDALESLHAETEEL
EAMYGDLRAELRQRNVETLERMLNETFDLVYGNDAYSRIRLDGEYELTVFQKDGTALDPE
QLSGGERALFNLSLRCAIYRLLAEGIEGAAPMPPLILDEPTVFLDSGHVSRLVDLVDEMR
DLGVRQIIIVSHDDELVGAADELVTVEKDPTSNRSSVRQEDPEELIAAESFAGD
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
atgcgcttcgaccggattcgactccagaatttcaagccgtacgcggagacggacctcgat
ctgaccgacggcgtgaccgtcatccacgggctgaacgggagtggaaagtcgtcattattg
gaggcgtgtttcttcgcgctctacggtgcgcgcgcgttagacgagaacttagaggacgtg
atgaccaccggaacagaggaagccgagatagaactgtggttcacccacgatggcgggtcg
tatcacatccatcgccgtctccgcaaatctggtgaccgtgtgcaaacagcaaaatgcctc
ctcgaagggccggatgtgtcagtcgatggcgcacgcgacgttcgcggattcgttgcggac
ctcctccggatggacgcggaggcgttcgtcaactgcgcgtacgttcggcagggcgaggtg
aacaaactcatcaacgcgacgcccagccaacggcaggacacgatagacgacctgctccaa
ctcggtaagttagaggagtaccgcgtccgcgcgggaaaagcccgcctcggcgtcgaagac
gtattgaccgaacgtcgcggtgccctctccaaagtcgaatcgcagatcgaagcgaaggag
gacgctggactccacgaacgcctgaacgcgctcgaaaccgaactcggtgaagttgacgac
cagatcgaacgctacgaagaccaacgcgagaaggcggtcgagacgcgagagaatgcagaa
gaggtcctcgaaacgtaccgcgagaaacgcgcggaactggacgaactcgccgaagatatc
gccgacctgcgcgagacaatcgagtcggacgaacggaaacgagaaacgcttcggagtgag
gtcggcgaggcacgcgacagcgtcgaggagattcgagatcgaatcgagaagaaacgagct
gagacgacgctggacgaggtaacgtccgacgccatcgcggcccggcgcgatgaactcgac
gagcgagaagcggagattcggtccgacctcaccgacgtgcgggagcggcggacgatgctc
tcgaaccaggccaagaaactgcgcgaacgcgccgaggagttcgagtcgcgggcggccgag
aagcgctcccgtgccgacgaactggacgatgacgccgaggatgccgaagaagaactcgaa
cagcgcagcgcacgcctcgaagaactcgaagccgaactggagtcgctaactgcggagttc
gaagacgcgccggtcgaactcggcgaagcggcctcccaccgtgacgaggttcgggagacg
ctgaccgacgtgcgcgcggaactcactgagacgaacgccgagggagagaacgtccgcgat
aggctcacagaggcccgggaactgcgtgatgaagggaagtgtcccgagtgtggccaaccc
gtcgaagattcgccgcacgtcgattcaatcggtgagtacgaagcgcgaatcgaggagtta
gaggcgacgctttcggaccttcgagagcgacgcgagacactgaactctcgtttagagcgt
gcggagtcgcttgtcgagacggagaaccgaatcggcgaactccgcaacagcagggagttg
ttcgagcaacggatcgaggacgcacgcgagacggtggaggaacgccgtactgaggccgag
acgctacgcgaagcggccgacaaactggaggcggaggcagacgagaaacggacggctgcg
acgacgcaagccgaggcggcggaggatgccgcggagaccgtcgaaggcctcgaatcggac
ctcgaatccgtcgccgaagccgagagccgcctcgacacgctctctgatctacgctcgaaa
ctgaccgagactgaatcggagatagagcgtctcgaagagcggcgcgagagcatcgccgag
ttgaacgacgagcggcgggagcgactagccgagaaacgcgaccgacgctccgaactcgcc
gacgaggtggacgaatcgaccgtcgaagaggcgaaagcgaagaaagagaaggctgagaac
tacctcgaacaggttgacgaggaactcgctacactccgcgagaaacgcgacagtcttcag
agcgatatcggcggggtgaacggtgaactcgaacagttagaagcactccgtgaagaccgc
gacgaactcgccgcgcgcgtcgatgcgctcgaatcgcttcacgcagagaccgaggagtta
gaggcgatgtacggcgatctgcgcgcggaactccgccagcgaaacgtcgagacgctcgaa
cgaatgctgaacgagacgttcgacctcgtgtacggcaacgacgcctactcgcgtatccgt
ctcgacggcgaatacgaactcacggtcttccagaaggacgggaccgcactcgatcccgag
cagttatccggtggcgagcgggcgctgttcaacctctcgcttcggtgtgccatctaccgg
cttctcgcggagggaatcgaaggtgcggcaccgatgccacccctcatcctcgacgaaccg
acggtgttcctcgactcggggcacgtttcgcgcctcgtagacctcgtagacgagatgcgt
gatctcggcgtccgacagattatcatcgtgagtcacgacgacgaactcgtcggtgcggcg
gacgaactcgtgaccgtcgaaaaggacccgaccagcaaccggtcgtcggttcggcaggaa
gatcccgaggaactcatcgcggccgaatcattcgccggcgactga
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