Halogeometricum borinquense: Hbor_24820
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Entry
Hbor_24820 CDS
T01359
Name
(GenBank) Transcription initiation factor IIB (TFIIB)
KO
K03124
transcription initiation factor TFIIB
Organism
hbo
Halogeometricum borinquense
Pathway
hbo03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hbo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Hbor_24820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hbo03021
]
Hbor_24820
Transcription machinery [BR:
hbo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
Hbor_24820
Prokaryotic type
Archaeal type
TFB
Hbor_24820
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_C
Sigma70_r4
Motif
Other DBs
NCBI-ProteinID:
ADQ68038
UniProt:
E4NRZ2
LinkDB
All DBs
Position
complement(2379689..2380672)
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AA seq
327 aa
AA seq
DB search
MTRPTRQRERDSDRTRWQGEREEDAAEDEDDIDIEDMDEEDLVRTGDGELIHEPTGIVVE
EEQIDPGPEWRAFNHSERQSKSRVGAPTTQTMHDKGLTTTIDWKDKDAYGRSISSRKRSQ
MHRLRKWQERIRTKDAGERNLQFALSEIDRMASALGVPRSVREVASVIYRRALNEDLIRG
RSIEGVATSALYAACRKEGIPRSLEEISDVSRVERKEIGRTYRYISQELGLEMKPVDPKK
YVPRFSSELDLSKEVQSKANEIIETTAEKGLLSGKSPTGYAAAAIYAASLLCNEKKTQRE
VADVAQVTEVTIRNRYQEQIEAMGIHG
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgacacggcctactcgccagcgggagcgagacagtgatagaacacggtggcagggcgaa
cgcgaagaggatgctgccgaggacgaggacgatattgacatcgaggacatggacgaggag
gatctcgtccggaccggggatggtgagctaattcacgaaccgaccggcatcgtcgtcgaa
gaagaacagatcgaccccggtccggagtggcgcgcgttcaatcactccgaacggcagtcg
aagtcccgcgtcggcgcgccgacgacgcagacgatgcacgacaagggattgacgacgaca
atcgactggaaggacaaagacgcctacggtcggtccatctcctcgcggaagcgctcgcag
atgcaccgcctccgtaagtggcaagagcgaatccggacgaaggacgccggtgagcgtaac
ctccagtttgcactttccgaaatcgaccgtatggcctccgcgctcggcgtaccgcgctcc
gtccgcgaagtcgcctcggtcatctatcgtcgcgcactgaacgaagacctcatccgcggc
cggtctatcgaaggtgttgccacctccgcgctctacgccgcctgtcggaaggaaggaatc
ccccgttcactcgaagagatttccgacgtttcgcgcgtcgaacggaaagaaatcggtcgg
acgtatcgctacatctcccaagaactcggcttggagatgaagccggttgacccgaaaaag
tacgtcccacgattctcctcggaactcgacctctcgaaagaggtgcagtcgaaagcaaac
gagattatcgagacgacggccgaaaaaggccttctctcgggtaaatcaccgacgggatac
gccgccgccgccatctacgccgcctcactgctctgtaacgagaaaaagacacagcgcgaa
gttgccgacgtagcacaggtgacggaagtcaccatccgaaatcggtaccaagaacagatc
gaagcgatgggtatccacggctaa
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