Halogeometricum borinquense: Hbor_24980
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Entry
Hbor_24980 CDS
T01359
Name
(GenBank) LSU ribosomal protein L24A
KO
K15172
transcription elongation factor SPT5
Organism
hbo
Halogeometricum borinquense
Pathway
hbo03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
hbo00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
Hbor_24980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hbo03021
]
Hbor_24980
03019 Messenger RNA biogenesis [BR:
hbo03019
]
Hbor_24980
Transcription machinery [BR:
hbo03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
Hbor_24980
RNA polymerase I system
Hbor_24980
Messenger RNA biogenesis [BR:
hbo03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
Hbor_24980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt5-NGN
KOW
Ribosomal_uL24m-like
SH3_KIN17_C
KOW4_SPT5
KOW5_SPT5
KOW2_Spt5
Glyco_hydro_65C
Motif
Other DBs
NCBI-ProteinID:
ADQ68053
UniProt:
E4NS07
LinkDB
All DBs
Position
complement(2391743..2392198)
Genome browser
AA seq
151 aa
AA seq
DB search
MSEVPIFAVKTTARQEQTVADMIATREEAEIHAVLAPDSLTSYVMVEADNNAVINRVLEE
IPHARGLVGDGQATSSMAEVEHFLSPTPDVEGIAEGDIVELVAGPFKGEKARVQRIDETK
DQVTVELYEATVPIPVTVRGDQIRVLDSDER
NT seq
456 nt
NT seq
+upstream
nt +downstream
nt
gtgtctgaggtgcccatcttcgccgtaaagacgaccgcgcgacaggagcagactgtcgcc
gacatgatcgcaactcgtgaagaagcggagattcacgccgtcctcgcacctgactcgctg
acgagttacgtgatggtggaggcggacaacaacgcggtcatcaaccgcgtcttagaggag
attccgcacgcccgtggcctcgtcggcgacggtcaagcaacctctagtatggccgaggtg
gagcacttcctctcgccgacgccggacgtggaagggattgcagaaggagacatcgtcgaa
ctcgtcgccgggccgttcaaaggcgagaaagcacgcgttcagcgtatcgacgaaacgaaa
gaccaggtcaccgtcgaactgtacgaggcgacggttccgattccggttaccgtgcgcgga
gaccagattcgcgtgctggactccgacgagcgctaa
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