Halogeometricum borinquense: Hbor_27770
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Entry
Hbor_27770 CDS
T01359
Name
(GenBank) ATP-dependent DNA helicase, Rep family
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hbo
Halogeometricum borinquense
Pathway
hbo03420
Nucleotide excision repair
hbo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hbo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Hbor_27770
03430 Mismatch repair
Hbor_27770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hbo03400
]
Hbor_27770
Enzymes [BR:
hbo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Hbor_27770
DNA repair and recombination proteins [BR:
hbo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Hbor_27770
MMR (mismatch excision repair)
Other MMR factors
Hbor_27770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
UvrD_C_2
AAA_30
AAA_22
AAA_12
Herpes_ori_bp
AAA_11
CBP_BcsQ
Motif
Other DBs
NCBI-ProteinID:
ADQ68321
UniProt:
E4NL72
LinkDB
All DBs
Position
2647862..2649712
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AA seq
616 aa
AA seq
DB search
MSDSDAKVTRLFGGPGSGKTTALLDRVEEMLEDDDVTIRDILVVSYTRAAAAEIRERLAE
RLDISPRALQGNVATMHAKAYELLDLSRNDVVGEKDKKEFCEEYGVEFEDEYGGAGRRTA
RSTTIGNKIIATSQWLQRTRRDVADWYDVPFNWNVEEVRLPPEIDPNAQEGNKYTPTWPS
DDDRIDVPGVIRGWRKYKGDNGLVGFADMLERVRQRSLVPNVDYLVIDEFQDITTLQYDV
YQEWLPHLEGVLIAGDDDQVVYAWQGADPNLLLDAERDEDVVLPNSYRLPSRILDVVNEE
IRHIDKRQEKDLHPRKEGGVVEGVASPSMLDLARNVRYTIEEDEDDESIMVLFRARYQMF
QFIDEFLPLGIPFSVLTDQRMWTDRLTEYVEAIEKLEREENINGLEARRLADMLQESAFG
SNERDDLFDYIDELQEETGVEDLTDLEVELDVITDHAPFVPDGAAAGDMVRKVTSFQRKS
VEAYFAGEYQGMDPNRVRVGTIHSAKGREADHVFVSTDLTEKVVEQMAASVDDEEVSGVE
EFTTSTDPVPILTDNERRVFYVGMSRARERLVILENLIKGAPTLPVSVLLHNEVRDTPVE
ELLEEAQTGDAPAPEP
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgagtgactccgacgcgaaagtcacccgtctcttcggggggccgggtagcgggaaaacg
acagcactcctcgaccgggtcgaggagatgctcgaagacgacgacgtgacgattcgtgat
atcctcgtcgtctcctacacccgcgccgccgccgccgagattcgagaacgcctcgcagag
cgactcgatatctcgccacgtgcgttgcagggcaacgtcgctacgatgcacgcgaaggcg
tacgaactcctcgatctctcgcggaacgacgtcgtcggtgagaaggacaaaaaggagttc
tgtgaggagtacggcgtcgagttcgaggacgaatacggcggtgctggtcgccgaaccgcc
cgttcgacgactatcggcaacaaaataatcgccacgagccagtggcttcagcgaacccgt
cgtgacgtagccgactggtacgacgtcccgttcaactggaacgtcgaggaggtccgactc
ccgccggaaatagaccccaacgcacaggaaggcaacaaatacactccgacgtggccctct
gacgacgaccgaatcgacgtcccgggcgtcatccgcgggtggcggaaatacaaaggtgac
aacgggctcgtcggcttcgctgacatgctcgaacgggttcggcaacggtcgctcgttccg
aacgtagactacctcgtcatcgacgaattccaggacatcacgaccctgcagtacgacgtc
taccaagagtggcttccccacctcgaaggcgtcctgattgcaggtgacgacgaccaggtt
gtctacgcgtggcagggtgcggacccgaacctgctcctcgacgccgaacgcgacgaggac
gtcgtactgccgaactcctaccgacttccctcgcgtattctcgacgtagtgaacgaggag
attcgtcacatcgacaagcgccaagagaaagacctgcacccgcggaaagaaggcggtgtt
gtcgaaggggtcgcctcaccatcgatgcttgatctcgcgcgcaacgtccgctacaccatc
gaagaggacgaagacgatgagagcatcatggtgctgttccgcgcgcgctatcagatgttc
cagttcatcgatgagttcctcccgctcggcatcccgttctcggtactcaccgaccagcgg
atgtggacggaccgcctcacggagtacgtcgaggcaatcgagaaactggagcgcgaagag
aacatcaacggattagaggcgcgacgcctcgcagacatgctgcaagagtccgcgttcggg
tcgaacgaacgcgacgacctgttcgactacatcgacgagttgcaggaagagaccggcgtc
gaagacctcaccgacctcgaagtcgaactggatgttatcaccgaccacgcgccgttcgtc
cccgacggggccgccgcgggcgacatggttcgtaaggtcacgtcgttccagcgcaaatcc
gtcgaagcgtacttcgctggcgagtatcagggaatggaccccaaccgcgtccgcgtcggc
accatccactccgcaaagggtcgtgaggccgaccacgtgttcgtctcgacagacctgacc
gagaaggtggtcgaacagatggccgcctcggtggacgacgaagaagtcagcggtgtcgag
gagttcaccacttcgaccgaccccgttccaatcctaaccgacaacgagcgccgcgtcttc
tacgtcgggatgtcccgcgcccgcgaacgccttgtcatcttagagaacctcatcaaaggt
gcgccgacgctcccggtgagcgtcttgctccacaacgaggttcgtgacactccagtcgaa
gaactgctggaggaggcacagacgggcgacgccccggcacccgaaccgtag
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