Halogeometricum borinquense: Hbor_30090
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Entry
Hbor_30090 CDS
T01359
Name
(GenBank) extracellular solute-binding protein, family 5
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
hbo
Halogeometricum borinquense
Pathway
hbo02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
hbo00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Hbor_30090
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hbo02000
]
Hbor_30090
Transporters [BR:
hbo02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Hbor_30090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
DUF7537
Motif
Other DBs
NCBI-ProteinID:
ADQ68546
UniProt:
E4NU26
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All DBs
Position
pHBOR01:complement(37415..39376)
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AA seq
653 aa
AA seq
DB search
MRDNTNQGGGASFGRRRLIKYLAATGVATSLAGCSGGDSSGTATTGDSTATSGSTAGDTT
EQPSSDEIPAGGTFKKAVTATTNGLNVFRVGDGETTARIELVMDQGFIRLGPEYDNILPL
WFEDVTVEQPVNQIEIKLRENLQFGEEYGELTADDYLWCIDNIWKADWASFAYANDFYVG
KEDKPIQFEKVDKYTIRETIPSSRPFFPYNEPLSYQFPIPKELAKPYVEEQDAEGLEKDD
SIMRATFNGNLGPWDLKNWKQQSVMEFERAEDYYLRKWAKEDDRVPDVFAEAPFFDEYHL
QYFDKQQTARQALQADEIDTAYIPSTKISSYKQKEGLKLYKNPYRSWSGYLGINQRANGW
SQLRNKKVRHAMAHIYNNDFIVNNILKGRAEVQNTLHPAWGPYSPDDVVTFDGSLEKAKQ
LLKEGTSSDYGYSGDKFVGPDGEQVELTLVYQSDELDDLRAAYLKKRLGKVGIKLTQQTT
SWPSLMKNYFNCTNPAEGVSDAENLGYGENGKDHPSIYNHGPWDKAVSSKSWDFMLTLGF
SYGPLTPAGTIASLFSEEGNFNAYGYTPGKDLAAMRDEAQTAESREAAVGTIQEMLAYLS
EERPVIFEYNPYNYYAYRNNVEGMGQSPPDSHFDYQTDRWTAKMYFSDGTSGR
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgacaacacgaaccaaggcggtggcgcctcattcggccggcgtcgcctcataaaa
tatttagccgcaactggcgtggccacgagtctcgccggctgtagcggcggtgactcctcc
ggcacggctacgaccggggattccacggcgactagtggctcgaccgcaggggatacgacc
gaacagccttcctccgacgaaattcccgccggtggaacgtttaagaaggcagtgaccgca
accacgaacggtttgaacgtcttccgcgtcggcgacggtgagacgactgcccgcatcgaa
ctcgtcatggatcagggattcattcgtctcggtccggagtacgataacattctccctctc
tggttcgaagatgtgaccgttgaacagccagtcaaccaaatcgaaatcaaactccgggaa
aatctacagtttggcgaggagtacggcgaactgaccgccgatgactacctgtggtgcatc
gacaacatctggaaggctgactgggcgagtttcgcttacgcgaacgacttctacgtcggc
aaagaagataaaccgatccagttcgagaaggtggacaagtacacgattcgggagacgatt
ccaagttcgcgtccgtttttcccatataacgaaccgctcagctaccagttcccgattccg
aaggaacttgcgaaaccttacgtggaggagcaggacgctgagggactcgaaaaggacgat
tcgatcatgcgggcgacgttcaacgggaacctcggtccatgggacctcaagaactggaag
caacagtccgtcatggagttcgagcgggcagaggactattaccttcgcaagtgggcgaaa
gaagatgaccgcgttcccgatgtcttcgctgaagctccgttcttcgacgaataccacctg
cagtatttcgataaacaacaaacggcccggcaagccctccaagccgacgaaatcgacact
gcgtacattccatcgacaaaaatcagttcgtacaaacagaaggaaggtctcaaactctac
aagaatccgtaccgctcttggtccggatacctcgggatcaaccagcgtgcgaacgggtgg
tctcaacttcgaaacaagaaggttcgccacgcgatggcccacatttataacaacgatttc
atcgtcaacaatatcctcaaaggccgtgccgaggtgcagaacacgcttcatcccgcgtgg
ggaccgtactctccggacgacgttgtgacgtttgatgggtcactggagaaagccaagcaa
ctcctcaaagaaggcacgtcgagcgactacggatacagcggcgacaagttcgtcggtccg
gatggagagcaagtcgaactcaccctcgtctaccagtccgacgaactggacgacctccgg
gcggcctatctcaaaaagcgcctagggaaagtcggaatcaagcttacacagcagaccacg
tcgtggccgagtctcatgaagaactacttcaactgtacgaaccccgcagagggtgtctct
gacgccgaaaacctcggatacggtgagaacggaaaggaccatccctcgatatacaaccac
ggtccgtgggacaaagcggtctcctcgaaatcgtgggacttcatgctgacgctcggattc
agctatggtccgctgactccggcgggcacaatcgcgtcgctgttcagcgaggaaggcaac
tttaacgcctacgggtacacgcccggtaaggatctggcggcgatgcgcgacgaagcgcag
acggcagagtcgcgtgaagccgcggtcggtactattcaggagatgctcgcgtatctctct
gaggaacgtcccgtcatcttcgagtacaacccgtacaactactacgcgtaccgcaacaac
gtggaaggcatgggtcagagtccgcccgacagtcacttcgactatcagactgaccgctgg
acggcaaagatgtacttctctgacggaaccagcggccgttag
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