Halogeometricum borinquense: Hbor_32030
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Entry
Hbor_32030 CDS
T01359
Name
(GenBank) PAS domain S-box
KO
K06930
HTH-type transcriptional regulator, bacterioopsin transcriptional activator and related proteins
Organism
hbo
Halogeometricum borinquense
Brite
KEGG Orthology (KO) [BR:
hbo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hbo03000
]
Hbor_32030
Transcription factors [BR:
hbo03000
]
Prokaryotic type
Helix-turn-helix
Other families
Hbor_32030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAT
GAF_2
GAF
PAS_4
HTH_10
PAS_9
PAS
GAF_3
PAS_3
PAS_8
PAS_7
HTH_20
Sigma70_r4
HTH_IclR
PAS_GdpP
HTH_24
TrmB
HTH_1
Motif
Other DBs
NCBI-ProteinID:
ADQ68738
UniProt:
E4NUL8
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All DBs
Position
pHBOR01:complement(270076..272847)
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AA seq
923 aa
AA seq
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MTSNSLTSALRETLALFEQSGTPLTTTEIADCLELGRRSTYDRLDRLVNHGRLETKKVGA
NARVWWRPTEPQTEDEGFNAWPTTVESLVDDVLSRVDVGVFVLDEDFEVAWASEAVERYF
GIDRSQLVGREKPELVESTVAPVIDNAERFTERVLATYEQETGTERFECRVTSGDGREER
WLEHRSGPIESGPYAGGRVEVYYDVTYRKRRERKLRENRAQYETIVDTVEDGIYAVNEEM
EFVVVNDGFCELTGYDREELLGSHVSMVHDNDKIMPRVESKLQTVIDTDRESARIELDIR
TKSGEKVPCESRFALFPLEGSYGRCGVVRDVSDRLEREQKLQRRIRQQKSITKLGRQALE
VRDIDTLLTEATRQVANTLGNDYCKILDLDADADELLLRQGVGWHDGIVGSATVSAVADD
SQAAHTLRTDQPVVVSDLETETRFSGPDLLREHDVRSGISTIVGPSDDPWGILGTHDTAA
KSFSTHDVNFVQSVANILASAIARHADERELVRQRERLAALNSLNEVVRETTDVVINQST
REEIEETVCEFLAKSDSYSFAWVGDVDTTSKRVNVRTKAGTKGYLDDIVISVDPNDERSN
GPTGRAFKTGEIQTTQNIDQDPSHDPWREHIEAHEFRSSAAIPIIHEDAIYGVLNVYSKR
LNAFEGEERAVVEQLGEIIGHAIAATERKRALMSDDVIEIAFQIPDVFEALNAESNQNGR
ISFDHMMPIEDERYLLYGSATGDAIDNVRSIVEQLPYWESVSFHDEGKKTDFEAQLSNPP
VLSVVASAGGSIKQAVIEDGDYNITVHVAPTADIRQITKTIEETYPMAQLLKHRQVTRRD
NTTNRIQRVLRNQLTERQRTALEAAYHAGFFQWPRETTGEGVAESLGVSPPTFHQHLRKA
EQKVFDHLLSPVLPTQPPSPRTE
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atgacctccaactcgctgacgagcgctcttcgagagacgcttgcgctcttcgagcagtcc
ggtaccccgctgacgacgacggaaatcgcggactgtctcgaactcggtcggcgaagcacg
tacgaccgcttggaccgtctcgtcaaccacggccgactcgagaccaagaaagtaggagca
aatgcccgcgtctggtggcgtccaacggaaccgcagaccgaggatgagggattcaacgct
tggcccacaaccgttgagtcgttggtcgatgacgttctcagccgcgtcgacgtcggtgtg
ttcgtccttgacgaggacttcgaagtcgcgtgggccagcgaggccgtcgagcgatacttc
ggtatcgaccgcagtcaactcgttggccgggagaaacccgaactcgtcgaaagcactgtt
gcacccgttatcgacaacgcggagagattcaccgagcgagtactcgcaacgtacgagcag
gaaaccggaaccgaacggttcgagtgccgggtgaccagcggagacggacgcgaggaacgc
tggctggagcatcgaagcggacccatcgagtcgggaccgtacgcgggtggccgcgtcgag
gtgtactacgacgtgacgtatcgaaagcgccgagagcggaaactccgagagaaccgagcg
cagtacgagacgatagtcgataccgtcgaagatggcatctacgctgtcaacgaagagatg
gagttcgtcgtcgtcaacgatgggttctgcgagttgaccggttacgaccgcgaagaactg
ctcgggagccacgtgagtatggtccacgacaacgacaaaattatgcccagagtggagtca
aaactccaaacggtcatcgatacagaccgagagtcagcgaggatcgaacttgacatcagg
acaaaatccggggagaaagttccgtgtgagagccggttcgcgctgttcccattggaagga
agctacgggcggtgtggtgtcgtccgcgacgtctccgaccgcctcgaacgcgaacagaaa
ctacagcgacggatacgtcagcaaaagtcaatcacgaaactcggtcggcaagcgctcgaa
gttcgggatatcgatacgttgctgaccgaagccacaagacaggtcgccaacaccctcggc
aacgactactgtaaaattctcgacctcgacgccgatgcggacgaactactgcttcgacaa
ggagtggggtggcacgacggaatcgtcggctccgcgactgtgtccgccgtcgcagacgac
tcccaagcggcccacacactgcgaaccgaccagccagtcgtggtatcagacttagagaca
gaaacgagattcagcgggccggacctgctcagagagcacgacgttcgaagcggtatcagc
accatcgttggcccgagtgacgatccgtggggtatcctcggaacacacgatacagcggcg
aaatcgttctccacgcacgacgtcaacttcgtccagtcggtcgccaacatcctcgcctcg
gcgattgctcgtcacgcggacgaacgagaactcgtgcgtcagcgcgagcgattagcggcg
ttgaacagcctcaacgaagtcgtccgggagacgacagatgtggtcatcaaccaatcaacc
cgcgaagagatcgaggaaaccgtctgtgagttcctcgccaaatcggattcgtactcgttc
gcatgggtcggcgacgtggacacgacctcgaagagagtcaacgtccgaaccaaagctgga
accaaaggctatctggacgatattgtcatctccgtggacccaaacgacgagcggagcaac
ggtcccacggggagagcattcaaaaccggagaaatacagacaacgcagaatatcgaccaa
gatcccagccacgacccgtggcgtgagcacatcgaagcgcacgagttccgctcgtctgcc
gcaattccgatcatccacgaagacgcgatatacggagtcttgaacgtctacagtaagcgt
ctcaatgcgttcgaaggcgaagaacgggcggtcgtcgaacaactcggtgaaatcatcggc
cacgccatcgccgcaacggaacgaaagcgggcactcatgagcgatgacgtgatcgaaatt
gcatttcagatacctgatgtcttcgaggcgttaaatgccgaatcaaaccagaacgggcga
atctcgttcgaccacatgatgcctatcgaagacgagagatatctgctgtacgggagcgcg
acgggggacgcaatcgacaacgttcggagtatcgtcgaacaactcccgtactgggaatct
gtctcattccacgatgaaggaaagaagacggatttcgaggctcaactctcaaatccccct
gttctctcggtggtcgcttcggctggcggttcaatcaagcaagctgtcatcgaagacggc
gactacaacatcaccgttcatgtcgcaccgacggcggacattcgacagataaccaaaacg
atcgaggaaacgtatccgatggcgcagttgctcaaacaccgacaggtgacccggcgggat
aacacgacgaatcgaatccagcgcgtcttgcgtaaccaactgaccgagcggcagcgaacg
gcgcttgaagccgcctatcacgctgggttcttccagtggcctcgggagacgacgggcgag
ggcgtggccgaatcgttaggtgtctcgccgccgacgttccaccaacaccttcgaaaagcc
gagcaaaaggtgttcgatcacctgttgtcacccgtgttaccgacacaaccaccgtcgcct
cgaacggaatag
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