Halogeometricum borinquense: Hbor_35160
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Entry
Hbor_35160 CDS
T01359
Name
(GenBank) ABC-type dipeptide transport system, periplasmic component
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
hbo
Halogeometricum borinquense
Pathway
hbo02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
hbo00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Hbor_35160
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hbo02000
]
Hbor_35160
Transporters [BR:
hbo02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Hbor_35160
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
ADQ69036
UniProt:
E4NV47
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All DBs
Position
pHBOR02:complement(237187..238809)
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AA seq
540 aa
AA seq
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MLGTGTVTGLAGCAGDGGSSTASSSASEGGDGTHESDLSGDDLRGGHLRVAITPETTTIN
PVMMDSQFPQRWGVKLFYSTLTRLDPNLEVYGDLAEDWSSNDASDEWTFTLREATFHDGG
TVTASDVKATFETVYDDDVGSPGKGTMGAIERVEAVDEKTVRFTLENANSDFHKLVAKGW
GSIVPEEIVTDPKRRQALGSEEHGSGAFTLESFSPGDKLTGVRYDDYYRTGDDGEPLPYI
DKITQITIPEKSNQVNALRTGDVDIIWQPGYGQWGTLQGLSDANTHRTPGGEIANFVMDV
NTEPWSDKRVRQAVMHAIDREAIIEGVQDGLGTVGQDSLLSPAYEYYADVGAREQDLEKA
KQLLADAGYPDGINLTEEFGLTLETASIPHMEGTAVMMQEQLQQIGIEFDIQVMSYDNFS
ADVWTKSPFYVGAYGMRISGANFMKLLLHSEGAWNDESHWSNEEFDTAVDNAIAETDPDR
KQKLMKKAQQIVRDEGPYAIPFYTDTIGASKKYVKKYSLNPLAYLFFPDEYALGPDAPTK
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgctcgggacgggcacagtaactggattagcgggctgtgctggcgacgggggaagttcg
acggcatccagtagtgccagcgaaggcggagatggaacccatgagtccgatctaagcggc
gatgacttacggggcggtcatctccgcgtggccatcacgccggagacgacgacgattaac
cccgtgatgatggattcccagttcccgcagcggtggggagtgaaactgttctattcgacg
ctcacccggctcgaccccaatctggaagtgtacggggacttagcggaggattggtcgtca
aacgacgcctccgacgagtggacgttcacgcttcgcgaggcaacgttccacgatggcggc
actgtgaccgcgtcagacgtgaaagcgaccttcgagacggtatacgacgacgacgttggg
agtccggggaagggaacgatgggcgctatcgagcgtgtcgaagccgttgacgaaaagacg
gttcggttcacgctcgaaaacgcgaactcggactttcacaagttagttgcgaaagggtgg
ggttcgattgtccccgaagagattgtgacggacccaaagcgtcggcaagcgctcggttcc
gaagaacacgggtcgggagcattcacgctcgaatcgttctcccccggcgacaaactgacc
ggcgttcggtacgatgactactaccggacgggcgacgacggcgaaccgctcccctacatc
gacaaaatcacgcagataacgattccagaaaagagcaatcaagtgaacgccctccgaacg
ggagatgtcgatattatctggcaacccggttacggacagtggggaacgttacaagggctc
tcagacgcgaatacgcaccgcactcccggcggtgaaatcgctaacttcgtcatggacgtg
aacaccgagccgtggtccgacaagcgagtcaggcaagccgtgatgcacgccatcgaccgc
gaagcgattatcgagggcgttcaagacggacttgggacggtgggacaggattcgttgctc
tcacctgcctacgagtattacgctgatgtcggtgctcgagaacaggacctcgaaaaagcg
aaacagctcctcgctgacgcaggctatcccgacgggataaacctgaccgaagagttcggc
ctcacgctggagacggccagcatcccacacatggagggaaccgccgtcatgatgcaagag
cagctccaacagatcggaatcgaattcgacatccaagtgatgagctacgacaacttcagc
gccgacgtgtggacgaaatcgccgttctacgtcggtgcatacgggatgcgaatcagcggt
gctaacttcatgaagctcctcctgcactcggaaggagcgtggaacgacgaatcacactgg
tcgaacgaagagttcgacacggcagtcgacaacgccatcgctgaaaccgaccccgaccgg
aagcaaaagctcatgaagaaagcccagcagatcgtccgtgacgaaggaccgtacgcgatt
cccttctacacggatacgatcggcgcctcgaagaaatacgtgaaaaaatacagtctcaat
ccgctcgcgtacctgttcttccccgatgaatatgcactaggtccagacgcacccacgaag
tga
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