Halogeometricum borinquense: Hbor_37910
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Entry
Hbor_37910 CDS
T01359
Name
(GenBank) DNA/RNA helicase, superfamily I
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hbo
Halogeometricum borinquense
Pathway
hbo03420
Nucleotide excision repair
hbo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hbo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Hbor_37910
03430 Mismatch repair
Hbor_37910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hbo03400
]
Hbor_37910
Enzymes [BR:
hbo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Hbor_37910
DNA repair and recombination proteins [BR:
hbo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Hbor_37910
MMR (mismatch excision repair)
Other MMR factors
Hbor_37910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ADQ69496
UniProt:
E4NWS6
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All DBs
Position
pHBOR05:6952..8832
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AA seq
626 aa
AA seq
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MDLEDIEITGIEDVPVTESLAYHGPPGTGKTSKSAARVAKLIQDHDYGIEDVAWVTYRRS
LARDTLARLASWDIIDPSELENPSDGATRYIGTAHAVANRCASIGEGVVEPWHRSDFCEK
RGMQFWTSEPWEDSAGKLLFRVLDYLANANTTPEDKAALRECPHTDDLRDHWQGDIVEAW
YEWEDYKGQMNIIDFHEMLKRPLQEGESPGRPILVIDEYHDVTALMDALFRSWMEDAEIV
IVAGDPHQVVNAYDGASPAFFEDLDLPTVLLDTTYRVPEEHWALATRMLADAHTPPAVTR
DGRGRVNDINSPRFEHSEENGWVNLPGRDTPGSPGWICEKFGREETLFLTRTRMQADGVG
AALEAAGIPYRSQPELHGWNTEETDIRLAVHNALQKIEGYSPANFRYGGNKAFGEYTGNN
KNPADISLKNSEAAALLEATSAHDLDITRSDANDLVEELRDDEDGHLTLREFDDYVTKSF
WERYTAGAGSVNRLNKGPFGSGSSGERELRALRAALNRQDGPISPDSISCHAITIHASKG
MEADDVVVYDGISNRILREIQVNDESRRNEYRTWYVALSRAKKRLHVMRDGFAWTNSIIP
ENLQAAAREAYQEGHVDGDLPGGETA
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atggaccttgaggacatcgaaatcacgggaatcgaggatgttccagtcaccgaatcgctc
gcctaccacggcccgccgggtaccgggaagacgtcgaagtcggcggcccgggtagcgaag
ctcatccaggaccacgactacggcatcgaggacgtcgcctgggtgacctacagacgctcg
ctcgcccgcgacacgctcgcacggctggcgtcctgggacatcatcgacccgtccgagctg
gagaacccgagcgacggggccacccgctacatcggcaccgcacacgcggtcgccaaccgc
tgcgcttccatcggcgagggtgtcgtcgaaccgtggcaccgctccgacttctgcgagaag
cgagggatgcagttctggacgtcggaaccctgggaggacagcgccgggaagctcctcttc
cgggttctcgactacctcgccaacgcgaacaccacgcccgaggacaaggccgcgctgcgc
gagtgcccgcacaccgacgatctccgcgaccactggcagggcgacatcgtcgaggcgtgg
tacgagtgggaggactacaagggccagatgaacatcatcgacttccacgagatgctgaag
cgcccgctccaggagggcgagtctcccggacggcccatcctcgtcatcgacgagtaccac
gacgtcaccgctctgatggacgctctcttccggtcctggatggaggacgcagagatcgtc
atcgtcgccggcgacccgcaccaggtggtgaacgcctacgacggggccagcccggctttc
ttcgaggacctcgacctcccgaccgtcctcctggacactacctaccgcgtccccgaagag
cactgggcgctcgccacgcgcatgctcgccgacgcccacactccgcctgcggtcacccgc
gacggacgagggcgtgtgaacgacatcaacagcccgcgcttcgaacactccgaagagaac
ggctgggtgaacctgccgggccgcgacacgccggggtcgccgggctggatctgcgagaag
ttcgggcgtgaggagacgctgttcctcacccggacgcggatgcaggccgacggcgtcggg
gcagccctcgaagccgccggcatcccgtatcgctcgcagccggagctccacggctggaac
accgaggagaccgacatccgtctcgccgtccacaacgcgcttcagaagatcgaagggtac
agcccggcgaacttccgctacggcggaaacaaggccttcggcgagtacacggggaacaac
aagaaccccgccgacatctcgctgaagaacagcgaggccgcggccctcctggaggcgacg
tcggcgcacgacctcgacatcacccggtccgatgcgaacgacctcgtcgaggaactgcgc
gacgacgaggacggccaccttaccctccgggagttcgacgactacgtcacgaagtcgttc
tgggagcgctacaccgccggcgcaggatcggtgaaccggctgaacaagggaccgttcggg
tccgggtcgtccggcgagcgcgaactccgggcactccgggccgcgctgaaccggcaggac
ggcccgatcagccccgactcgatcagctgccacgccatcaccatccacgcctcgaagggg
atggaggccgacgacgtcgtcgtctacgacggcatcagcaaccgcatcctccgagagatc
caggtgaacgacgagtcccggcggaacgagtaccgcacgtggtacgtcgcgctctcgcgg
gcgaagaagcgcctgcacgtgatgcgcgacgggttcgcctggacgaacagcatcatcccc
gagaacctccaggccgcggcccgcgaggcctaccaggaaggccacgtggacggcgatctc
cccggaggtgagacggcgtga
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