Halogeometricum borinquense: Hbor_39650
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Entry
Hbor_39650 CDS
T01359
Name
(GenBank) WD40-like repeat protein
KO
K17713
outer membrane protein assembly factor BamB
Organism
hbo
Halogeometricum borinquense
Brite
KEGG Orthology (KO) [BR:
hbo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hbo02000
]
Hbor_39650
Transporters [BR:
hbo02000
]
Other transporters
Pores ion channels [TC:
1
]
Hbor_39650
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
PQQ_2
Beta-prop_ACSF4
PQQ
Beta-prop_CGLA
Beta-prop_EMC1_N
WDR55
WD40_CDC20-Fz
Beta-prop_THOC3
Beta-prop_WDR36-Utp21_1st
WD40_Prp19
Motif
Other DBs
NCBI-ProteinID:
ADQ69279
UniProt:
E4NW59
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All DBs
Position
pHBOR03:173416..174333
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AA seq
305 aa
AA seq
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MDGTVYVGAGDGTLYAVEATAGTRAWTFSKPSEPIVSSPTVSGSAVYFGADDGVLYAVDT
ESGDRIWTFDEPTGKVSSSPTVSDGTVFVGADDKTLYAVDADTGDQVWTFEKPVGPVSSS
PTVSQGIVYVGADDRRLYAVDAESGEQVWVSDDPTGPVYSSPEVTDGTVFVGSWERLLAI
DADTGNTTWTADVPRTGIDSSPTVVEGVVYVGVLDGTLRALSAEDGTEHWSFTDPAGLIA
SSPTVLEGVVYVGATDGSLYAVESASGEQRWEFTDPDAGLFSSPTVVSSLEAATSAGSRV
DFAYQ
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atggatggtacggtctacgtcggtgcaggcgacggaacgctgtacgctgtcgaagcgaca
gccggaacgcgtgcgtggacgttctccaagccaagcgaaccaatcgtctcgtcgccgacc
gtgtcgggaagtgctgtgtatttcggtgcggatgacggcgtgctgtatgcagttgataca
gagagcggcgaccgaatctggacgttcgacgaaccaacaggcaaggtgtcttcgtcaccg
accgtttctgacggaactgtctttgtcggcgcagacgataaaacgctgtacgcagttgat
gcagacactggtgaccaagtctggacgttcgaaaagcccgtcggtccggtctcgtcgtcg
ccaaccgtttcgcagggcatcgtttacgtcggggctgatgaccggcgactatacgcggtt
gacgctgagagcggcgagcaagtctgggtatccgatgacccgactggacccgtatactcg
tcgccggaggtaactgatgggactgttttcgttggctcgtgggagcgtctgttagctatc
gacgccgacacggggaacacaacgtggacggccgacgttccgagaactggaatcgactcc
tcaccaacggtcgtcgaaggggtcgtgtatgtgggagttctcgacggcacgctgcgagcg
ctttccgccgaagatggaacagagcactggtcgttcactgatcccgctggcttgatcgca
tcttcgccgaccgtcttggaaggagttgtctacgtcggagctaccgacggatcgctatac
gcggtcgagtcagcttctggcgaacaacggtgggagttcactgaccccgacgcgggtctt
ttttcgtctccgacagtcgtctcatccctcgaagctgcaactagtgcgggaagccgggta
gatttcgcgtaccaatga
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