Halogeometricum borinquense: Hbor_39860
Help
Entry
Hbor_39860 CDS
T01359
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
hbo
Halogeometricum borinquense
Pathway
hbo00260
Glycine, serine and threonine metabolism
hbo00460
Cyanoamino acid metabolism
hbo00630
Glyoxylate and dicarboxylate metabolism
hbo00670
One carbon pool by folate
hbo00680
Methane metabolism
hbo01100
Metabolic pathways
hbo01110
Biosynthesis of secondary metabolites
hbo01120
Microbial metabolism in diverse environments
hbo01200
Carbon metabolism
hbo01230
Biosynthesis of amino acids
hbo01240
Biosynthesis of cofactors
hbo04981
Folate transport and metabolism
Module
hbo_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
hbo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Hbor_39860
09102 Energy metabolism
00680 Methane metabolism
Hbor_39860
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Hbor_39860
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
Hbor_39860
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
Hbor_39860
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
Hbor_39860
Enzymes [BR:
hbo01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
Hbor_39860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
DegT_DnrJ_EryC1
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
ADQ69300
UniProt:
E4NW80
LinkDB
All DBs
Position
pHBOR03:196204..197454
Genome browser
AA seq
416 aa
AA seq
DB search
MVGSNHLEQTDPAVYSAIQNERQRQEDSLGLIASENHVSEAVLEAQGSVLTNKYAEGYPD
ARYYGGCEHVDTVEQLAIDRAKELFGADYANVQPHSGTQANMGVYFAMLDPGDRILSLDL
THGGHLSHGHHVNFSGQLYEVEQYGVDPDSGYIDYDTLADHATEFDPDLIVSGSSAYPRE
FAYERIDEIAAAVGAYHLADIAHVTGLIAAGLHTNPVGNADFVTASTHKTIRAGRGGLIL
TTDEYAEQIDKAIFPGSQGGPLMHNVAGKAVGFKEALTDEFEEYAQQVVTNAKTLADTFS
ERGLSLVSGGTDKHYVLVDLRDSHPDVTGSDAEEALQSVGITVNKNTVPGETRSPFTTSG
IRVGTPALTTRGFTQSEMETIGHAIVDIIEHPEDDDVATDVATTVDQLCEAYPIYE
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggttggtagtaaccaccttgagcagactgacccagcggtctattctgctatccaaaac
gagcgacaacggcaagaagacagtctgggattgatcgcgtccgagaaccacgtctcggag
gctgtgcttgaagcacaaggatctgtcctcacaaacaaatacgcggagggctaccccgac
gcccgttactacggtggctgtgaacacgtcgataccgtcgaacagttggcgattgaccgt
gcgaaagaactctttggtgccgactacgctaacgttcagccgcacagtggcacccaggcg
aatatgggtgtgtactttgcgatgctcgatcccggtgaccgaatcctttcgttggatctc
actcatggtgggcatctctctcacggacatcacgtcaatttctcaggccaactctacgag
gtcgaacagtacggtgttgatcccgacagtggctatatcgactacgacacgcttgccgac
cacgcgaccgaattcgatccggatctgatcgtcagcggatcatcggcgtatccacgggag
tttgcgtacgaacgaatcgacgagattgcggcagcagtcggggcctatcatctcgcggat
attgctcacgtcacgggcctcatcgcggccggtctgcatacgaaccccgttggaaacgct
gatttcgtcacggcaagtacccataagacgatccgagcaggtcgaggaggattgattctc
acgacggacgagtacgcagagcagattgacaaagcgattttccccggtagccagggaggg
ccgcttatgcacaatgtcgccgggaaagccgtcggcttcaaggaggcgttgacggacgaa
ttcgaagaatacgcacaacaggtcgttacgaacgccaagacgttagctgacacgttttcc
gagagagggctatcactcgttagcggtgggacagacaaacactacgtcctcgttgatttg
cgggactcacatccggatgttacggggagtgacgccgaagaggcactccaatcggtaggg
atcaccgtgaacaaaaatactgttccgggcgagacacggtcgccgttcaccactagcggt
attcgagttgggacgccagcactcacaacgcgtgggttcacacagtcggagatggagact
atcggacacgctatcgttgacatcatcgagcatcccgaggatgacgatgttgctacagac
gtcgcaacgacagtcgatcagctttgcgaggcgtacccgatatacgaatga
DBGET
integrated database retrieval system