Halomonas sp. TD01: HPTD01_1337
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Entry
HPTD01_1337 CDS
T08977
Name
(GenBank) Exodeoxyribonuclease VII small subunit (EC
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
hbp
Halomonas sp. TD01
Pathway
hbp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hbp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
HPTD01_1337
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hbp03400
]
HPTD01_1337
Enzymes [BR:
hbp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
HPTD01_1337
DNA repair and recombination proteins [BR:
hbp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
HPTD01_1337
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
DUF4164
Phage_TAC_11
KxDL
SHOCT-like_DUF2089-C
Motif
Other DBs
NCBI-ProteinID:
CAH1042859
LinkDB
All DBs
Position
HaloTd01MainCirc:complement(1383223..1383519)
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AA seq
98 aa
AA seq
DB search
MSDNTPPAQDFAATVSQLETIVERLESGELSLEDALTAFEQGVRLTRDAQQRLDNAELKV
RALSEDREGKLDVTSFTAGPETDNATNHGNDSEETPPW
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacaacactccacctgcgcaagatttcgccgcaacggtttcacagcttgaaacc
attgtggaacgccttgagtccggcgaactctcattggaggacgcgctgaccgcgtttgaa
cagggcgtgcgacttacccgtgacgcccagcagcgtctcgacaacgccgaactaaaagtt
cgtgcattaagtgaagaccgcgagggtaagcttgacgttacctcttttacggcgggtcca
gagacggacaatgccactaatcacggcaacgacagcgaggaaacgccgccatggtaa
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