Halomonas sp. TD01: HPTD01_1483
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Entry
HPTD01_1483 CDS
T08977
Name
(GenBank) Hydrolase of unknown specificity RsbQ, part of a novel [RsbQ - PAS domain] bacterial sensing module
KO
K19707
sigma-B regulation protein RsbQ
Organism
hbp
Halomonas sp. TD01
Brite
KEGG Orthology (KO) [BR:
hbp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hbp03021
]
HPTD01_1483
Transcription machinery [BR:
hbp03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
HPTD01_1483
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Abhydrolase_1
Abhydrolase_6
Hydrolase_4
Abhydrolase_4
Ndr
Motif
Other DBs
NCBI-ProteinID:
CAH1043005
UniProt:
A0AA35GYF7
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All DBs
Position
HaloTd01MainCirc:1553716..1554525
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AA seq
269 aa
AA seq
DB search
MLTKERVIARNNVTVVGAGNKTLMLAHGFGCDQHMWYHLIPQLKEHYTLVMFDYVGSGRS
TISAFSESRYSALEGYARDVTEICDALDLSEVHFVGHSVSCNIGLLAAIASPERFASHLM
ICPSPCFFNMPPDYHGGFERADLEELVGLMDRNHIGWANYLAPLIMGAESSPTLIGELSS
SFCSTDPVVAKTFARATFFSDYRHLLPQAKHPALVLQSAVDSLANPEVGRYIHAQMPNST
LRVMASEGHCIHMTHPELVAREIKAWLDN
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
gtgttgacgaaggagcgggtcatagctcggaataatgtaaccgtcgttggggcgggcaat
aaaacactgatgctcgcccacggtttcggctgtgaccaacatatgtggtatcaccttatc
ccccagcttaaagagcattacacgctggtcatgtttgattatgtagggtcaggtcgatca
acaatttctgccttcagcgagtcacgttacagtgcgctggaaggttatgctcgtgatgtc
accgagatttgtgatgctctcgatctgagcgaggtgcattttgtaggccattcggttagc
tgcaacattggcttgttggcggcaattgccagtcctgaacggttcgccagccaccttatg
atttgtccatcgccttgctttttcaatatgccgccagactatcacggtggatttgagcgt
gctgatcttgaagaactcgttggtttaatggatcggaatcatatcggctgggctaattat
ctggcaccgctcattatgggggcagagtcgtctccgactttaattggtgagctctccagc
agcttttgttcgaccgatccggtggtggctaaaacgtttgcaagagctactttcttttcg
gactaccggcatttactgccccaagcgaaacacccagcgcttgtgcttcaaagcgcagta
gactcccttgccaacccggaagtaggtcgttacatccatgcacagatgcctaatagcacg
ctgcgtgtcatggcaagcgaggggcactgcatccacatgacgcacccagagcttgtcgct
cgggaaattaaggcgtggttagataactga
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