Halomonas sp. TD01: HPTD01_1741 Help Entry HPTD01_1741       CDS       T08977                                  Name (GenBank) T6SS component TssM (IcmF/VasK)   KO K11891   type VI secretion system protein ImpL Organism hbp  Halomonas sp. TD01 Pathway hbp03070   Bacterial secretion system Brite KEGG Orthology (KO) [BR:hbp00001]  09130 Environmental Information Processing   09131 Membrane transport    03070 Bacterial secretion system     HPTD01_1741  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    02044 Secretion system [BR:hbp02044]     HPTD01_1741 Secretion system [BR:hbp02044]  Type VI secretion system   Imp/Vas secretion system core components    HPTD01_1741 SSDB OrthologParalogGFIT Motif Pfam:  IcmF-related_N IcmF-related IcmF_C IcmF_helical DUF2207_C Wzy_C EptA_B_N Phage_holin_3_6 MMR_HSR1 NAD_binding_9 DUF6161 Vma12 DUF6338 Motif Other DBs NCBI-ProteinID:  CAH1043263 LinkDB All DBs Position HaloTd01MainCirc:1836514..1840158 Genome browser AA seq 1214 aa AA seqDB search MWSTLKSKLSRWVPGFSRAQTAKNRANAHGNKAKGLLRLSTLLWVVLLIVLVIAIWWWGP NWEVRETTPLAPLMNRLLATLLVVTVVAIIWGVSLARRLRRLDDERQQEKARQEDPAIDQ VERQEDSLNAVLKEITGSLGGGSKSRYSLPWFLVMGIENAGKTSLINRSGQNFALTHVMK ASGQSSKQSQLGFDWWIGDKAVLIDPDGELLTQGALEGEESQVLQRRLWEHFVEWLERNR AQRPLDGVVLVLDLARLSHAKVAVRKAYAALLRSRLRELMEQHGTRLPVYVTFSKMDLLH GFDSFFRHYSRSARKTPLGFTFTPASIDTPGKWEAEFEADYDAMLARVNQLLPAMLSECR DREERESVFRFVRQLAGLRDILFGFLSEALSSDRFSTAAIVRGAYFTSVYQQGVPEDPFV DAAARRYGMKDSVQSAHRATRSALYFTEDLFEKVIYPETGLASDNARVAQRRRRMRTYSL AACSIMGVILVAGWSHFYQKNSISLTAVEERASAFLATHPEAFQSDDPSGYEFLDPLDRL RDTMETFESYRTHVTYLADMGLYQGHIIGAQVERAYLAMLEQQFLPAIMIGIVDDMNRSE EGSNAKLALLRVLRMMSDASGRQPERVERFMAQRWQAYFPQQGEVQERLLTHLDYALEHS DLEGRIAEGSPRAKQAMAPLQGSIDAAQHELARQPIDERVYLALKAAGNRHGERLDLRHS VGTLFDRVFMARDDDPEHVRLAHLLTRDGFEKYFLNELSRATELALVDAWVLGQREDINF SDADTQQLQTALREHYVGDYHVSWRDALRNTHLVPLPDIRQAIVVADSLVGPQRPLDRLL AAIERNTSLYPELPVDDEEAREALRQSQRYQLASAIEQPFTPVNRLSQARDGNPSTLEEI KQAVSALRNYLLDIEESNNTGRAAFLTVRDRLSLRGNDPIDNLQRIAGNAPEPVGRMLQS LADQSWQLMMVRATRHLESQWLDDVVAPYQAHLAGRYPLSPNASQEVALSDFEDFFAPGG TLDSFYQDSLKPFIEGAPEYLVDADGNSLLRDSLYTAVQQAEQIRRAYFSRDGALDVEFA LEPISLSPDKRRSVISVDGQLIEYAHSASQRVSMIWPNALRGGTESRITMVPSEINRSPR SITQNGAWAWFRLLEEADITSVSERELELRFNVAGGAMRYRLFADGAPNPFTRPLAAGFQ LPSALYADRGDHAD NT seq 3645 nt NT seq  +upstreamnt  +downstreamnt atgtggtcaaccttaaaatcaaaactgagccgctgggtgcctggcttttcccgggcgcaa accgcgaaaaacagggccaatgcgcacggtaacaaagccaaaggacttctgcgcctctca acactgctttgggtggtactactcatcgtgttggtaattgctatttggtggtgggggcca aactgggaggtgcgggaaaccactcctcttgctcccttaatgaaccgtttgctggcaaca cttttagtagtcacggtagtggccatcatatggggtgtcagccttgcccgccgattacgt aggctggatgacgaacgccagcaggaaaaagctcgtcaggaagaccctgccatcgatcaa gttgaacgccaagaagactctttgaacgcagtgttgaaagaaataactggtagcttggga ggtggaagcaaaagtcgttatagcttgccttggtttttggtcatggggatagagaatgct ggtaaaaccagtcttatcaaccgctctggccagaactttgcacttacccatgtgatgaaa gcctccgggcagagcagcaaacagagccagctaggtttcgactggtggattggtgacaaa gcggtattgatagaccctgatggtgagctattgacgcagggggcgctggagggtgaagag tcgcaggtgcttcagcgtcggttatgggaacactttgtggagtggcttgaacgcaaccga gctcaacgaccactagatggagtggtattggttctggacctagctcgtttgagtcatgcc aaggtggctgtgcgcaaagcctatgcggcactgctgcgtagccgtttacgcgaacttatg gaacaacatggtactcgcctgccggtatacgtgacctttagcaaaatggacttgttgcac ggttttgatagcttctttcgtcactactctcgctcagctagaaagaccccccttggcttt acgtttacccctgcttccattgatacccctggcaaatgggaagctgagtttgaggctgat tacgatgccatgctggctcgcgtgaaccagcttttacccgctatgttgtcagagtgtcgt gaccgtgaagagagagagtcggtatttcgttttgtacgtcagctcgccgggttaagagat atcctatttggctttttaagcgaagcgttatccagcgaccgtttttctactgctgcgatc gtgcgtggcgcttacttcacatcggtatatcaacagggggtgccggaagatcccttcgtg gatgcagctgctcggcgctatggcatgaaagatagcgttcagtctgcccaccgcgctact cgtagtgcgttgtacttcaccgaagatcttttcgagaaggttatttatccggaaacaggg ttggcgagcgataatgccagagttgcacagcggcgcagacgcatgcgtacgtacagcctt gccgcctgctcaataatgggtgtaatcctcgttgcagggtggagtcacttctaccaaaaa aatagcatttcgcttactgctgtcgaagagcgcgcatcagcgtttttggcgactcaccct gaagcgtttcaaagcgatgacccctcgggttatgaattcctcgaccccctggatcggctg cgtgacacgatggaaacctttgaaagctatcgtacacacgtaacgtatctagcagatatg gggttatatcaagggcacatcataggtgcccaggtagaacgcgcctatctcgccatgcta gagcagcagtttctgcctgccatcatgattggcattgtggacgatatgaaccgatctgaa gagggcagcaacgccaaattggcgctcttacgcgtattacgcatgatgtcagatgctagt ggtcgccaacccgaaagggttgagcggtttatggctcagcgttggcaggcgtactttcct cagcaaggcgaggtgcaagagcgcttgctaacgcatctagactatgctttggaacatagt gacctagaagggcgtattgctgaggggagcccacgtgctaagcaagcgatggcaccgctg caaggaagtatcgacgcggcacaacatgagctagcccgccaaccgattgatgagcgtgtt tacttagcgctaaaagcggcaggcaatcgtcatggtgagcgattggacctccggcatagt gttggcacgctgttcgatagagtatttatggcacgcgatgatgaccctgaacatgtgcgc ctggcacatctgctaacccgagatggctttgagaaatactttctaaacgaattatcgcgc gcaacagagctagcactggttgatgcctgggtgttaggccagcgcgaggacattaacttc agcgatgcagatacacagcaactgcaaaccgcgctgcgggaacactatgttggcgattac cacgttagttggcgcgacgcgctgcgtaatacgcacttggtgccactgcccgatattcgt caagctattgtggtagccgactccttagtagggccgcagcggccgctcgatagactatta gccgcgattgagcgaaatactagcctctatccagagctgcccgtcgatgacgaagaagcc cgcgaagcattgcgtcaatcccagcgttatcaattagcctcagctattgagcagcccttt acgccggtcaaccgactcagccaagctcgtgatggtaatccctcaactcttgaggagatt aagcaagctgtgtcagcactgcgaaactatctgctagatatagaggagtcgaataatacc gggagagctgctttcttgacggtacgtgaccggctatcgctacggggtaatgaccctatc gataacctgcagcgcatcgctggcaatgcgccagaaccggtaggtcggatgttgcaaagt ctggctgaccaaagttggcagttaatgatggttagagccacacgccatcttgaaagccaa tggctggatgatgttgttgcaccctatcaagcacatttggctggccgttatccattgtcg ccgaatgccagtcaggaagtggcgttaagcgacttcgaggacttctttgctccaggtggc acgctagattcattctaccaagacagtctgaaaccctttattgaaggggctcccgagtat ttggtggatgccgacgggaattcactgctgcgagacagcctttatacggcggttcaacag gcagaacagattcgccgcgcttactttagccgagacggtgcactcgacgtagagtttgcc cttgagcctatcagcctaagtccagataagcggcgtagtgtgatcagtgttgatggacag cttattgagtatgcacacagcgctagccaacgcgtttctatgatttggcctaatgctctg cgcggcggtacggaaagccgcatcacgatggtacccagtgagattaaccgctcaccgcgg agtatcacgcagaacggcgcttgggcatggtttcgcctactagaagaagcggatattacc agcgtaagcgagcgtgagctggagctacgttttaacgtggctggcggtgcgatgcgctat cgtctgtttgccgatggtgctcctaatccgtttacccgcccattagccgcaggctttcaa ctgccatcagccctctatgctgatcgaggtgatcatgctgactaa

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