Halomonas sp. TD01: HPTD01_1776
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Entry
HPTD01_1776 CDS
T08977
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
hbp
Halomonas sp. TD01
Brite
KEGG Orthology (KO) [BR:
hbp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hbp03400
]
HPTD01_1776
DNA repair and recombination proteins [BR:
hbp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
HPTD01_1776
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
Zn_ribbon_LapB
ChlI
DUF7125
Lon_C
DnaB_C
nSTAND_NTPase5
AAA
AAA_16
AAA_22
AAA_14
AAA_5
SLFN-g3_helicase
nSTAND3
Zeta_toxin
NTPase_1
AAA_24
ABC_tran
GvpD_P-loop
Viral_helicase1
AAA_29
cobW
KdpD
DZR
Motif
Other DBs
NCBI-ProteinID:
CAH1043298
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All DBs
Position
HaloTd01MainCirc:1885391..1886767
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AA seq
458 aa
AA seq
DB search
MAVAKAKSAFVCTECGAEYRKWQGQCSSCQEWNTLSEIRLASARPGSGAAMGRAGYAGDL
SRDVVDLGNVDLSEVPRLTSTFAEFDRVLGGGLVPGSAVLLGGNPGAGKSTLLLQTACKL
AQQRRILYVTGEESLSQVAMRAHRLQLPTNGLKMLAETSVETILAVAEREKPEILVIDSI
QTMHLEDISSAPGGVAQVRESAAALTRFAKQTNTVLLLVGHVTKDGTLAGPKVLEHMIDA
SLLLEGGADSRFRTLRGQKNRFGAVNELGVFAMLEQGLKEVKNPSAIFLSRQEEQAPGSL
VMVVWEGTRPILVEVQALVDESALGNPRRVAVGVDQNRLAMLLAVLNRHGGLFTGDQDVF
LNVVGGVKVLETSADLAVLLAVVSSLQNRALPKELVVFGEVGLSGEIRPVPSGQERIAEA
AKHGFLRAIVPRGNAPKQAPKGMEVIPVDKLSDALEAL
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggcgaaagcgaaaagtgcctttgtgtgtaccgaatgcggtgcggagtatcga
aagtggcaaggccagtgctccagctgccaggaatggaacacgctaagtgagattcggttg
gctagtgcgcgccctggaagtggcgcagccatgggacgggcgggctatgcaggagacctg
tcgagagatgtggtggatcttggcaatgtggatctcagcgaagtaccccgcctcacttcg
acctttgctgagtttgatcgtgtgctaggtggcggcctggtgccggggtccgctgtgttg
ctggggggcaacccaggcgctggtaagtccacgctgcttctgcaaaccgcctgcaagctc
gcccagcagcggcgtattctatatgtcaccggggaggagtcgctttcccaagttgcgatg
cgcgcccaccgcttacagctgcctactaatgggctgaaaatgttagcggaaaccagtgtt
gaaacaattttagcggtggctgaacgagaaaaaccggaaattttggtcatcgactcaatt
caaacgatgcacctagaggatattagctcagcgccaggtggcgttgcccaggttcgtgaa
tctgcggcagctctgacccgctttgctaagcaaacgaacacagtattgttactggttggg
catgtaacgaaggatggaacgctggctggccctaaagtactggagcacatgattgatgcc
tcgctgctattagagggtggagctgactctcgatttagaacccttcgcggccagaaaaac
cgctttggtgcggtgaatgagctgggtgtgtttgcaatgcttgagcaaggtttaaaagaa
gtcaaaaaccccagtgcgattttcctatcacgccaagaagaacaggctcccggtagtttg
gtcatggtggtatgggaaggtacccggccaattctggtggaagtgcaggcgttagtcgat
gagtctgcattggggaatcctcgccgtgtggccgttggcgtcgatcaaaaccgacttgct
atgctgctagccgtgctaaaccgtcacggtggtctgtttaccggtgatcaagatgttttc
cttaacgtggtaggcggcgtgaaagtactcgaaaccagtgctgacttggcggtgctccta
gcggtggtatccagcctgcaaaatcgcgctctgccaaaagagttggtggtatttggcgaa
gttgggctttcgggagagattcggcctgtgcccagcgggcaagaacgtattgctgaagcg
gctaagcatggatttttaagggcgattgtgccgcgtggtaatgcacccaagcaggctccg
aaggggatggaggtcatccctgtggataaacttagcgatgccctggaagcgctctaa
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