Halomonas sp. TD01: HPTD01_1925
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Entry
HPTD01_1925 CDS
T08977
Name
(GenBank) nuclease, putative()
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
hbp
Halomonas sp. TD01
Pathway
hbp03030
DNA replication
hbp03430
Mismatch repair
hbp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hbp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HPTD01_1925
03430 Mismatch repair
HPTD01_1925
03440 Homologous recombination
HPTD01_1925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hbp03032
]
HPTD01_1925
03400 DNA repair and recombination proteins [BR:
hbp03400
]
HPTD01_1925
Enzymes [BR:
hbp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HPTD01_1925
DNA replication proteins [BR:
hbp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HPTD01_1925
DNA repair and recombination proteins [BR:
hbp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HPTD01_1925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
CAH1043447
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Position
HaloTd01MainCirc:2075701..2076360
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AA seq
219 aa
AA seq
DB search
MSGMRLLDRHMSLLSGSLRTLMQRESDRRRWADSPYAWLFQPYMGEEMVALACQVSPGQS
PVLSVAAVVLSPGRVHTSRAWVATLAGEQNNNGSTLRRHHQLYATDTVLAPNAEHLGALA
EFIGNRPLIGWQLGRSVEQLNHLFKAGLGFGLPNAQVDVGKLHYRQLRRLHPQCETGGRL
TEALARWQMPALQWMGVLGDATASALLYLRLQREIAQQG
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
gtgagcggaatgcgcttgttagaccggcatatgtcattactcagtggctcgctacgtacg
ttaatgcagcgcgaaagcgaccgccgccgctgggcagattccccctacgcatggcttttt
cagccctacatgggcgaggaaatggtcgcgcttgcctgtcaggttagcccaggtcaatct
ccggtgctcagcgtagcggctgttgtcttaagtccggggagagtgcataccagccgagcc
tgggtggctactttggcaggagagcaaaacaacaatggttctacgctgcgtcgacatcat
cagctgtacgcgacggacacggtactggcacctaacgctgagcatcttggagcgctggct
gaattcatcggtaatcggccgctaattggttggcagctaggccgttcggtggaacagctt
aatcatttgtttaaagcagggctggggtttggtttgcctaatgcccaggtcgatgtggga
aaactgcactatcgccagttgcgtcgcttacatccacagtgcgagacgggcggccgccta
acggaagcacttgctcgttggcaaatgcccgctctccaatggatgggggtgttgggggat
gcaaccgcaagtgcgcttttgtatctgcgtttgcagcgtgagatcgcccagcaggggtag
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