Halomonas sp. TD01: HPTD01_2101
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Entry
HPTD01_2101 CDS
T08977
Name
(GenBank) Efflux ABC transporter, permease/ATP-binding protein slr2019
KO
K06147
ATP-binding cassette, subfamily B, bacterial
Organism
hbp
Halomonas sp. TD01
Brite
KEGG Orthology (KO) [BR:
hbp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hbp02000
]
HPTD01_2101
Transporters [BR:
hbp02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
HPTD01_2101
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
AAA_16
AAA_29
AAA_30
DUF87
AAA_25
AAA_21
AAA
DEAD
RsgA_GTPase
DUF815
FtsK_SpoIIIE
MMR_HSR1
AAA_5
Viral_helicase1
AAA_7
Motif
Other DBs
NCBI-ProteinID:
CAH1043623
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All DBs
Position
HaloTd01MainCirc:2266366..2268219
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AA seq
617 aa
AA seq
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MASSPPDSHAKPSGSQGAHSQSFQALVRLLRYAKGYRRRIAAATACSIINKLFDIAPEIL
IGVAIDVVVNQENSFVARLGFETPHQQITILAVLTFFIWAGESLFEYLFQILWRNLAQRL
QADMRQDTYEHAQRLDMAFFESKSSGQLVATMNDDVNQLERFLDGGANALIQVGVTVIAV
GAVFFVLSPLIALLAFTPIPLIIWGAFFFQRKAGPLYSDVREKVGDLASRLSNNLSGIAT
IKSFTSEAREAERLRDASEAYLEANRRAIKVSSAFIPVIRMAILAGFLATFTVGGMMALN
GSLNVGAYGVLVFLTQRLLWPLTGLAQVIDLFERAMASTKRILDLLEVPITVKDESTAPL
AAPVKGEVQFEAVSFHYASSQVGVSGVDLHVPAGNTLALVGATGSGKSTLIKLLLRFYDP
ASGRVLVDGQPITEVSMHSLRQAIGLVSQDVYLFEGSIRDNIAYGKPDASEAAIIDAAKT
AEAWSFIETLPQGLETPVGERGVLLSGGQRQRLSLARALLKDPPILVLDEATSAVDNETE
AAIQRSLKRIAHGRTVIMIAHRLSTIVHADEIVVIEQGRVAERGNHSSLLVADGHYAAQW
RVQTGAAQAGDVETLSH
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
gtggcttcttctccacccgattctcacgctaaaccttcaggaagtcagggggctcacagc
caaagctttcaagcactcgtgcgattgctgcgctatgccaaaggatatcggcggcggatt
gctgcggccaccgcctgttccattattaataagctatttgatatcgctccggaaatcctg
atcggtgtggcgattgatgtggtggttaaccaggaaaacagctttgtagcgcggctgggt
tttgaaacgccccaccaacaaatcaccattctggcggtgctgacgttctttatctgggcg
ggggagtcgctgttcgagtacttgttccaaatcctctggcgaaaccttgcccagcggcta
caggccgatatgcgccaagacacctacgagcacgcccagcgattggacatggcatttttt
gaatcaaaaagctccggtcagctcgtcgccaccatgaacgacgacgtgaaccagttggag
cgcttcctggacggtggtgccaacgcgctgattcaagttggtgtgacggtaatagcggta
ggcgccgtgttcttcgtgctgtcaccgctgattgcactgctggcgttcacgccgatcccg
ctcattatctggggcgccttcttcttccaacgcaaagccgggccgctttacagcgatgtg
cgtgaaaaggtgggtgatcttgccagccgcctttccaacaacctaagtggcattgccacc
atcaaaagctttaccagtgaagcgcgggaagccgagcgcctccgtgatgccagcgaagcc
tatttagaagccaaccgccgggcgataaaggtcagctctgcgtttatacccgtcatccgt
atggcgattttggcgggctttctcgccaccttcaccgtcggcggcatgatggcgctgaac
ggcagcctgaatgtaggcgcttacggcgtcctggttttccttacccagcgcttgctgtgg
ccgctcactggccttgcccaagtgatcgacttgttcgagcgcgcgatggccagcaccaag
cggattcttgacctattggaagtgccgattacggttaaagatgaaagtacagcgcctctc
gctgcacctgtgaaaggcgaggtgcagttcgaagccgtgagcttccactatgcctctagc
caggtgggagtgagtggcgttgatctccacgtgcctgcaggcaacaccctagcgctggta
ggtgctaccggttccggcaaatcgaccctgatcaaattgctgctgcgcttttacgaccct
gccagcggtcgcgtactggtcgatggtcagccgatcacggaggtcagcatgcactcgctg
cgtcaagcgatagggttggtgagccaggatgtgtacctgtttgaaggcagcattcgcgat
aacattgcttacggcaaacctgatgcctcggaggccgcgattattgacgccgccaaaacc
gctgaagcctggagttttattgaaacactgccccaagggttggaaaccccggttggcgag
cgaggggtattactctctggtggccaacgtcagcggctttcgctggccagggcgctgcta
aaagatccgccaattctggtgctggatgaagccactagcgcggtggataacgaaactgaa
gccgccattcaacgttcactaaaacgcatcgcccatggccgtacagtgattatgattgcc
caccggctttcgaccattgtgcatgccgatgaaatcgtggtgattgagcaaggacgcgtt
gctgaacgcggtaaccactcaagcttgttggtggctgatggccactatgctgcccagtgg
cgagtacaaaccggcgccgcccaggcaggggatgtggaaacacttagccattga
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