Halomonas sp. TD01: HPTD01_2329
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Entry
HPTD01_2329 CDS
T08977
Name
(GenBank) deoxyribodipyrimidine photolyase-related protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
hbp
Halomonas sp. TD01
Brite
KEGG Orthology (KO) [BR:
hbp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hbp03400
]
HPTD01_2329
Enzymes [BR:
hbp01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
HPTD01_2329
DNA repair and recombination proteins [BR:
hbp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
HPTD01_2329
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
Motif
Other DBs
NCBI-ProteinID:
CAH1043851
UniProt:
A0AA35E2H6
LinkDB
All DBs
Position
HaloTd01MainCirc:complement(2501419..2502999)
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AA seq
526 aa
AA seq
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MSKPLLLVLGDQLSLSLATLRDAPTNAVVALCEVAEEARYVPHHIHKIGLFMAAMRHFAQ
ALRDKGYNVHYSRIDDADNTQSLIAEAERIATQYGCNEVCVARPGEWRLWDAMQQRQEAS
LPWRIIEDDRFFTSPDDFSNWAKGRKQLRLEYFYREQRKRTGLLMEGDTPAGGKWNFDHD
NRDPIHASLSFPSLPTHCQDALTQEALNDAKHHFSEHMGSLENFNLPVTRRQALVDLNHF
LDKGLADFGRYQDAISDSEPFLYHSRLSAALNIGLLTPHEVCEAAEQQYLAGHAPINAVE
GFIRQILGWREYVRGLYWTQMPAYKRENQLGFERELPAFYWDGNTDMRCLQRAIQMTIDN
SYAHHIQRLMVTGNFALLCGVKPEALCDWYLAVYADACEWVELPNTLGMVLHADGGLMGS
KPYCASGKYIDKMSDHCQHCRYSPKQVTGPKACPFNSLYWHFLETNAEQLNRNPRMKLIY
GSLSRMKDEKRDAMRQQAEQFLASLPTSQSYGQALHTQGYFSKDTQ
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgtctaagcctttactactcgttcttggtgaccagctttcgctttcattggcgaccctg
cgcgacgcaccaactaacgcagtggtcgccctttgcgaggtcgccgaagaagcgcgttat
gtgcctcaccatatacacaagatcggcttgtttatggccgccatgcgacactttgctcag
gcgctgcgcgataaaggctataacgttcactacagccgtattgatgacgccgataatacc
cagtcactcatcgcggaagccgaacgcattgcgactcagtacggctgcaatgaagtgtgc
gtggcaagacctggtgaatggcggctttgggatgccatgcagcagcgtcaagaggcttcc
ttaccctggcgaataatcgaagatgaccgttttttcacctcacctgatgacttttccaac
tgggctaaaggacgtaaacagcttcgcttagagtatttctatcgagagcagcgcaaacga
acggggctgctgatggaaggcgatacacccgcaggtggtaaatggaactttgatcacgat
aaccgtgatccgattcatgcatcgctcagctttccctcacttcccacccattgccaagat
gcgttaacccaggaagcgctcaatgatgccaagcaccattttagcgagcacatggggtct
ctggagaacttcaacctacccgtcacccgccgacaggcgctggtggatttaaaccacttc
cttgataaggggctggccgactttggccgatatcaggatgcgatcagcgactcagaaccg
tttctttatcactccaggctgtcggcggcgctcaatatcggtctgctaacaccccatgaa
gtctgtgaagccgctgagcaacagtacctagcgggccatgctcctatcaatgcagttgaa
gggtttattcgtcaaatactcggttggcgagagtatgtgcgcgggctctattggacacaa
atgccggcttataagcgcgaaaaccagcttggctttgagcgcgagctgccggccttttat
tgggatggcaataccgatatgcgctgcttgcagcgcgccattcaaatgaccatcgacaac
agctacgctcaccacatacagcgcttaatggtgaccggcaactttgccctgctgtgtggt
gttaaacctgaagcgctctgcgactggtacttagcggtttatgccgatgcctgcgagtgg
gttgagctgcctaacactttgggtatggtgctgcatgctgacggcggtctaatgggctcc
aagccttattgcgcctccggcaaatatatcgacaagatgtctgaccattgccagcactgt
cgctattccccgaaacaagtaactggcccaaaagcgtgcccatttaacagcctttactgg
cattttctggaaaccaacgctgaacagctgaaccgcaacccacgcatgaaactgatctat
gggtcactctcacgcatgaaagatgaaaagcgtgacgcgatgcgtcagcaagctgaacag
tttcttgcctcactaccgaccagccaaagctacggccaagctctccacacgcaaggctat
ttctccaaggatactcaatga
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