Halomonas sp. TD01: HPTD01_2409
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Entry
HPTD01_2409 CDS
T08977
Name
(GenBank) Transcription accessory protein (S1 RNA-binding domain)
KO
K06959
protein Tex
Organism
hbp
Halomonas sp. TD01
Brite
KEGG Orthology (KO) [BR:
hbp00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
HPTD01_2409
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_central_region
Tex_YqgF
Tex_N
HHH_3
HHH_9
S1
HHH_7
YqgF
T2SSK
S1_RRP5
HHH_6
Motif
Other DBs
NCBI-ProteinID:
CAH1043931
UniProt:
A0AA35E2U3
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All DBs
Position
HaloTd01MainCirc:2605612..2608011
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AA seq
799 aa
AA seq
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MDVKQRIILRLATELNVRPEQVSATVELLDGGATVPFIARYRKEVTGALDDIQLRQLDER
LRYLRELEERREAVLLAIDEQGKLDATLKATIQAAETKQRLEDLYLPFKKKRRTKAQIAR
EAGLEPLADALLANPMLNPESEAAQYLRPEEGDIPAIEDAKAALDGAKQILMERFAEDPE
LIGRLRERLWQEGELSARVLDGKQQEGAKFSDYFEHDEKLAKVPSHRALAMFRGRNEGIL
SLAIRLPGEEDAPIHPAQIAIAKQVGVSDEGRPADKWLGEVVRWTWRVKLYTALETELLG
RLREQAELTAIEVFAANLKDLLLAAPAGQKVTLAIDPGLRTGCKIAVVDATGQFIDQATI
YPHAPQNRWDESLNVLAKLVKQHGVQLIAVGNGTASRETDKLAGDLLKALAPEHRLSKVM
VSEAGASVYSASEYASRELPDLDVTVRGAVSIARRLQDPLAELVKIEPKSIGVGQYQHDV
SQVQLSRSLEVVIEDCVNAVGVDLNTASSALLSRVAGLSAAIAENIVAQRNVQGAFKSRK
ELLEVSRLGPKTFEQCAGFLRISNAENPLDASAVHPEAYTLVERIAKQNSRDIKGLIGDS
ATLKALKPADFADERFGVPTVSDILKELDKPGRDPRPEFKAAEFREGVETLKDLTLGMVL
EGTVTNVTHFGAFVDVGVHQDGLVHISALSDRFIDDPRSVVKAGDIVTVKVMNVDIPRKR
VGLSMRLDDEPEQMQTASNSTNDELGKPTRSQRSASSGQNGQGQNGRRQSGQRQSGKPNE
AAAPMGALGAALLKAKQGK
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atggatgtcaaacaacgcattattttacgcttagccactgagctaaacgtacgacctgaa
caggtctccgcaacggtagagcttctggatggtggtgctaccgtgccgtttattgcccgt
tatcgtaaagaggtaacgggtgcccttgatgatattcagctgcgtcagttagatgaacgc
ctgcgctatttgcgggagctggaagagcgccgtgaagccgtactgttggctattgatgag
cagggcaagctggatgccacgctgaaagcaacgattcaggcagctgaaactaagcagcgc
ctagaagacttatacctaccgtttaagaaaaagcgccgcacgaaagcacaaattgcccga
gaggcgggtctagagccattggctgatgccctgttggccaatccaatgcttaatcccgaa
agcgaggcagcgcaatatctgcgccctgaagaaggtgatattcccgccattgaagatgcc
aaagccgcgcttgatggtgctaagcaaattctaatggagcgcttcgctgaagaccctgag
ctgattggccgtttgcgtgagcggttatggcaagagggcgaattaagtgcccgtgtgtta
gacggcaagcagcaggagggcgcgaagttctctgactactttgagcacgacgaaaaactg
gccaaagtgccatcccaccgtgctcttgctatgttccgcggtcgcaatgaaggcattcta
agcttggcgattcgtctgcctggtgaagaggacgcaccgattcaccctgctcaaatcgcc
attgccaaacaagtaggtgttagcgatgaaggtcgccccgccgacaaatggttgggcgaa
gtagtgcgctggacgtggcgagtaaaactctataccgcgcttgaaaccgagttgctgggt
cgtctgcgcgagcaggctgagctcaccgctatcgaggtgtttgccgccaacctgaaagat
cttttgctggcagcgcccgctgggcaaaaagtgacgctagcgattgacccaggtttaaga
accggctgtaagatcgcggtggtggatgcgaccggtcaatttatcgaccaagccaccatt
tatccccatgcgccgcaaaatcgctgggacgaatcgctcaatgtgctcgctaaactggtt
aaacagcatggcgttcaactcattgccgtcggcaatggtactgccagtcgtgaaaccgat
aagctggcaggtgatctgctgaaggcgttagcgcccgagcatcgtttgagtaaagtgatg
gtgtctgaggcaggtgcttcagtttactctgcgtcggaatacgcctctcgtgagctgcca
gatcttgatgtcaccgtgcgcggcgccgtctctattgcccgtcgcttgcaagacccgctc
gcggaactggtgaaaatcgagccgaaatccatcggtgtgggccagtatcagcatgatgtt
tcccaggtgcagctgtcacgcagcctggaagtggttatagaagactgcgtgaacgcggtc
ggtgtggatctcaacaccgcatcgagtgcgttgctttcccgtgttgctggtttaagtgct
gccattgctgaaaatattgttgcccaacgcaatgttcaaggtgccttcaaaagccgtaaa
gaattgttggaagttagccgccttgggccgaaaacgtttgagcagtgtgctggtttctta
cgcattagtaacgccgaaaacccgctggacgccagcgccgtccacccagaggcttacacc
ctggtagagcgtatcgctaagcagaatagccgagatattaaaggcttgattggtgatagc
gcgacgctaaaagcacttaaacccgccgactttgccgatgagcgttttggtgtgcctact
gtcagcgatattctcaaagagctggataagcctggccgtgatccgcgccctgagtttaag
gctgctgaattccgtgaaggtgtcgaaacgctcaaagacctgacgctgggaatggtgttg
gaaggtaccgtcaccaatgtgacccacttcggtgcctttgtggatgttggcgttcatcaa
gatgggcttgtgcatatttcagcgctctccgaccgctttattgatgacccccgcagtgtg
gtaaaagcaggcgatatcgttaccgttaaggtgatgaatgtggatataccccgcaagcgg
gtagggctttcaatgcgtttggacgatgaaccagagcagatgcaaacagcatcaaactct
actaacgacgagcttggcaagcctacgcgtagtcagcgttcggctagttctgggcagaat
ggtcaggggcagaatggtcgcagacagagcggccaacgccagagcggaaagcccaacgaa
gcagccgcacccatgggcgcgctcggcgcagcactgcttaaagcaaagcagggcaaatag
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