Halomonas sp. TD01: HPTD01_2623
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Entry
HPTD01_2623 CDS
T08977
Name
(GenBank) RNase adapter protein RapZ
KO
K06958
RNase adapter protein RapZ
Organism
hbp
Halomonas sp. TD01
Brite
KEGG Orthology (KO) [BR:
hbp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hbp03019
]
HPTD01_2623
Messenger RNA biogenesis [BR:
hbp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
HPTD01_2623
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PapZ_C
RapZ-like_N
AAA_18
SKI
AAA_22
AAA_21
mTERF
AAA_23
NACHT
CoaE
AAA_16
AAA_29
Motif
Other DBs
NCBI-ProteinID:
CAH1044145
UniProt:
A0AA35GZK1
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Position
HaloTd01MainCirc:complement(2855178..2856092)
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AA seq
304 aa
AA seq
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MQLVIISGRSGSGKSIALQALEDLGYYAIDNLPAMLLGSLVDELREQGERPQLAVSIDAR
NLPAALKQLPAMLESLRQKSIHFQVIYLTTDARILLERYSATRRRHPLTRDSDMTLEEAI
NKEEETLLDIRDLADLMIDTSRLSVHDLRRRITDQVAQKREDRLTLTLESFGYKRGVPLD
ADLVFDVRCLPNPYWDPTLRQYTGRDANIITFLKGYPVVEEMSNDIQTWLEKWLPAYQNS
QRSYMTIAIGCTGGQHRSVYMVEQLAQMLVKQAGEIQLRHRELGLHYTLSEQQPFTSSPS
TNAK
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgcaattggtgatcattagcggccgttcagggtccggtaaatctatcgccttacaagcg
ttagaagatcttggctattatgccatcgataatttgcccgctatgctgctcggctcgctg
gtggatgaactgcgtgagcaaggggaacgcccccaactagcggttagtatcgatgcacgc
aatctaccagctgcactaaagcagctgccagcaatgcttgaatcgttgcgtcagaaaagc
attcattttcaagttatctatctaaccaccgatgcgcgaattcttcttgagcgctactct
gccacgcgccgacgtcacccgctgacgcgcgatagcgacatgacgcttgaagaggccatt
aataaagaagaagaaactctgctcgacatccgtgatctcgctgacctaatgatcgacaca
tctcgcctgtcggttcacgatctgcgccgccggataaccgaccaggttgcccaaaagcgt
gaggatagattaaccctaacactagaatcatttggctataaacgcggtgtcccgcttgac
gctgatttagtctttgacgtgcgctgcctgccaaacccgtactgggatccaacgctgcgc
caatacactgggcgtgacgccaatatcattacttttctgaagggctatcccgtcgtggaa
gagatgagcaatgatatccagacatggttggagaagtggctgcctgcctaccaaaatagc
caacgcagttatatgaccattgcgatcggctgtaccggcggacaacaccgctctgtctat
atggtggaacaattggcgcaaatgctggttaaacaagcgggagaaatccaactccgtcat
cgtgagctaggcctgcattacaccctcagtgaacagcagccattcacatcctcgccttca
acaaacgcaaaataa
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