Halomonas sp. TD01: HPTD01_2975
Help
Entry
HPTD01_2975 CDS
T08977
Name
(GenBank) SSU ribosomal protein S1p
KO
K02945
small subunit ribosomal protein S1
Organism
hbp
Halomonas sp. TD01
Pathway
hbp03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
hbp00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
HPTD01_2975
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
hbp03011
]
HPTD01_2975
Ribosome [BR:
hbp03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
HPTD01_2975
Bacteria
HPTD01_2975
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
PCB_OB
Motif
Other DBs
NCBI-ProteinID:
CAH1044497
LinkDB
All DBs
Position
HaloTd01MainCirc:3233169..3234845
Genome browser
AA seq
558 aa
AA seq
DB search
MSESFAELFEQSLNDINMEPGAIVAAQVVDIDGDWVTVNAGLKSEGQIPASQFRDENGEL
TIAIGDDVHVALEAVEDGFGETRLSREKAKRAEAWKILEAAFEKDEVVKGVINGKVKGGF
TVDVDSIRAFLPGSLVDVRPVRDTAHLENKELDFKVIKLDPKRNNVVVSRRAVLEAENSA
EREALLATLQEGQQIKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRIKHPSEIVAVGDE
INVKVLKFDRERNRVSLGLKQLGEDPWVNIKDRYPEGTKVHAVVTNLTDYGCFAELEEGV
EGLVHVSEMDWTNKNIHPSKVVQVGDDVDVMVLDIDEERRRISLGIKQCTANPWETFNAE
YNKGDRVSGTIKSITDFGIFIGLEGGIDGLVHLSDISWTETGEEAVRNFKKGDEAEAVIL
SIDPERERISLGIKQMDSDPVAEYLSVNDKGSIVTGRIVEVDAKEAHVELATDVIAILKA
SEISADRIEDARNVLNEGDSIEARIVSVDRKSRQINLSVKAKEQDDTRQNLKKLRDQEPE
AGGPTTIGDLIKQQMGQD
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaagctttgctgaactgtttgaacagtctcttaacgacatcaacatggagcca
ggcgcaattgtcgcggctcaggttgtcgacattgacggtgactgggttaccgttaacgct
ggtctgaaatctgaaggtcagatccctgcgtcacaattccgcgatgagaacggtgaactg
accatcgctatcggtgacgacgtacacgttgcgcttgaagccgtagaagatggcttcggc
gaaacgcgtctgtcccgtgaaaaagccaagcgcgcagaagcttggaagattctggaagca
gccttcgagaaagacgaagtcgtcaagggcgtgatcaacggtaaggtcaaaggcggcttc
actgtcgacgtcgactctatccgtgccttcttgccgggctctctggttgacgttcgtccg
gttcgtgacactgcgcacctggaaaacaaagagctagacttcaaagtcatcaagcttgac
ccgaagcgcaacaacgttgttgtttcgcgtcgtgccgtgctggaagccgaaaacagtgct
gagcgtgaagcactgctggcaaccttgcaggaaggtcagcaaatcaaaggtatcgttaag
aacctgactgattacggtgccttcgttgatctaggcggcgttgatggtctgctgcacatc
actgacatggcgtggaagcgcattaagcatccgtctgaaatcgttgctgttggcgacgaa
atcaacgtcaaagtgctgaaatttgaccgtgagcgtaatcgcgtatcgctaggtcttaag
cagctgggtgaagatccttgggtcaacatcaaagaccgttacccggaaggcacaaaagtg
cacgctgtcgtcactaatctgactgactacggctgctttgctgagctggaagagggtgtc
gaaggtttggttcacgtctcagaaatggactggactaacaagaacattcatccgtctaaa
gttgtccaagttggcgacgatgttgacgttatggttcttgatatcgacgaagagcgtcgt
cgtatttctctgggcatcaagcagtgtactgctaacccgtgggaaaccttcaacgctgaa
tacaacaagggcgaccgtgtttcaggtaccatcaagtcaatcactgacttcggtatcttc
atcggccttgaaggcggtattgatggtctggttcacctgtctgatatctcttggacagaa
accggcgaagaagccgtccgtaacttcaagaaaggtgacgaagctgaagccgtcattctt
tcaatcgatcctgagcgtgagcgtatctccttaggtattaagcaaatggattccgatcca
gtcgctgaatatctgtcggttaacgacaaaggcagcatcgttacaggccggatcgtagaa
gttgatgccaaagaagcacacgttgagctggcgactgatgttatcgctatcctcaaggcg
tctgaaatcagtgctgatcgcattgaagatgcccgcaacgtgctgaatgaaggcgacagc
attgaagcgcgtatcgttagcgttgatcgtaagagccgtcagattaatctgtcggttaag
gcgaaagagcaagacgatactcgtcaaaacctgaagaaactgcgtgatcaagagccggaa
gcaggtggcccgaccactatcggtgatctaatcaagcagcagatgggtcaagactaa
DBGET
integrated database retrieval system
