Halomonas sp. TD01: HPTD01_3126
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Entry
HPTD01_3126 CDS
T08977
Name
(GenBank) Biofilm PGA synthesis deacetylase PgaB (EC 3.-)
KO
K11931
poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase [EC:3.5.1.-]
Organism
hbp
Halomonas sp. TD01
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Gene cluster
GFIT
Motif
Pfam:
GHL13
Polysacc_deac_1
ALMT
Motif
Other DBs
NCBI-ProteinID:
CAH1044648
UniProt:
A0AA35E405
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Position
HaloTd01MainCirc:complement(3363288..3365177)
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AA seq
629 aa
AA seq
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MDKIINCMMKIMLFAGTVLAGLPLSMANADEPPLLTILAYHDIRDQVADSGDADPYAIST
ERLVAHFDWLSENEFNVISLDQIIAASEGREVLPENPVLLTFDDGLKSTYTKLFPLLKAY
DYPAVVAVVTDWIENPEIQVEYGAEQLTTEAFVTWEQVREMNDSGLVEIASHSHNLHQGV
LGNPQGNTMASAVTRKYNEENGQYESDDSYQQRIRDDLARSVELIEAHTGIAPRTMVWPY
GAYNQVGNEQAISVGMPITFGLQNPPQQLEEGMPLLGLQRYLISDNPTLADLVGTIRLPS
TPPTRRIVQLDLDYVYDEDPEQQQRNLDALISRMHHLKPDYVFLQAFADPDGDDAADAVY
FPNRHLPMRADLFSRVAWQLYTRAGVQVFAWMPVLAWQLPDLDQRHALALPNPESGEVFR
LDPTNPEARRIINEIYEDLTAASWLSGLHFHDDALLRETELPALYPGNPEARSQYLIDFT
LELKRSAERNRSALKTSRNLYPMPVLEPESRAWFAQDIDQFVSAYDYTALMAMPWFEGSD
APKQWLEELADAVRRHPGAMDKTIFQLQTVDWRSGSRVPGDRLPELLRFLETKGVRHFGY
YPDDFILDMPPLSSIQQVISRNNFPYLKD
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atggataagatcatcaattgtatgatgaaaataatgctttttgctggcaccgttttggct
ggattgcctctatctatggcgaacgctgatgagccgcctttgttaaccattcttgcttat
cacgatatacgcgatcaagtcgctgacagcggtgatgcagacccttatgcaattagcact
gagcggttagttgctcattttgattggctgagcgagaacgaatttaacgttatcagtctt
gaccagattatcgctgccagcgaagggagagaggtgctgcccgagaacccagtattacta
acgtttgatgatgggttgaaaagcacttacacaaaactttttccattgcttaaggcatac
gactatccagctgtcgtggcggtggttaccgactggatcgaaaatccagaaattcaggtg
gagtacggtgctgagcaactgacaacagaagcgtttgtgacctgggagcaggttcgtgag
atgaacgactctgggttggtggaaattgcctcacactcccacaatctgcatcaaggcgta
ctaggtaatcctcaaggcaatactatggcgtcggcggtcacccgaaaatacaacgaagaa
aatggccagtatgaaagcgatgatagctatcagcaacggatacgtgatgacttagctcgt
agtgttgaattaatcgaagctcacaccggcatcgctccgcgcactatggtatggccttat
ggcgcttacaatcaggttggcaacgagcaggccattagcgtcggcatgccgatcaccttt
ggcctacaaaatcctccccagcagttggaggagggcatgccattattaggactacagcgt
tatctgatttccgataacccgacgttagctgaccttgttggcactatccggctaccgtct
acaccacccacccgacgcatagttcagctcgaccttgattatgtttatgacgaagatcca
gagcagcagcaacggaatctagatgctcttataagccgtatgcatcatctcaaacctgat
tacgttttcttacaggcttttgctgatccagatggcgatgatgcagccgacgctgtgtat
tttcccaatcgacatttgcctatgcgtgctgatctttttagccgcgtggcatggcagctc
tacacacgtgcaggggttcaggtttttgcctggatgcccgtcttggcttggcagctgccg
gatctggatcaacgccatgctcttgcgttacccaaccctgagtctggggaggtattcagg
ttggatccgacgaaccctgaagccaggcgcatcatcaatgaaatttatgaggacctcact
gcggccagttggttaagcggcctgcattttcacgatgatgctttgctgcgcgagacggaa
cttcccgcactttatcccggcaatcctgaagcgcgcagtcaatacctgatcgattttacc
ctggaactaaaacgctctgcagaacgaaaccgatccgcgttgaaaacatcgcgcaacctt
tatcccatgccagtactagagccagaaagtcgtgcttggtttgctcaggatattgatcaa
ttcgtgtcggcttatgactataccgcattgatggcgatgccttggttcgagggtagtgac
gctccgaagcagtggttggaagagttagctgatgccgtgcgtcgtcatccgggagcaatg
gataagacaatctttcagcttcagacagtcgattggcgttcgggaagccgggttcctggt
gataggttgcccgagttattgcgctttctagaaaccaagggcgtgcgtcattttgggtac
tatcccgatgatttcattctcgatatgccgccactgtctagcatccaacaggtgatatcc
aggaacaatttcccctacctaaaggattag
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