Halomonas sp. TD01: HPTD01_3155
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Entry
HPTD01_3155 CDS
T08977
Name
(GenBank) tRNA 5-methylaminomethyl-2-thiouridine synthase subunit TusD
KO
K07235
tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-]
Organism
hbp
Halomonas sp. TD01
Pathway
hbp04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
hbp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
HPTD01_3155
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hbp03016
]
HPTD01_3155
Transfer RNA biogenesis [BR:
hbp03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
HPTD01_3155
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DsrE
Lyase_8_C
Motif
Other DBs
NCBI-ProteinID:
CAH1044677
UniProt:
A0AA35E429
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All DBs
Position
HaloTd01MainCirc:complement(3393720..3394109)
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AA seq
129 aa
AA seq
DB search
MEYGLLVMGAPYSSAAPHSALRFAQAVLDKGHHIKGVFFYQDGVHNASQLMAPPQDELNM
REAWVELHRQHGVALDVCIAAALRRGVMSEAEAKRHGRVNFNLAAPFELTGLGQLLELQQ
RCDRLITFA
NT seq
390 nt
NT seq
+upstream
nt +downstream
nt
atggagtatggcttattggtcatgggggcaccgtatagtagtgcagcccctcattccgcg
ctgcgatttgcccaagcagtgctagataaagggcatcacatcaagggcgtttttttctat
caggatggcgtccataatgcctcccaactgatggctcctccccaggatgagctcaatatg
cgggaagcctgggttgaactgcatcgtcaacacggtgtggcattggatgtatgcatagcg
gcagcgttacgccgtggcgtgatgagtgaggcagaagcaaagcggcacgggcgagtgaat
ttcaaccttgcagcaccctttgaattaactgggctagggcaactgcttgagctacagcag
cgctgtgatcgattgattacgtttgcttag
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