Halomonas sp. TD01: HPTD01_3254
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Entry
HPTD01_3254 CDS
T08977
Name
(GenBank) Phenylalanyl-tRNA synthetase beta chain (EC
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
hbp
Halomonas sp. TD01
Pathway
hbp00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
hbp00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
HPTD01_3254
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
hbp01007
]
HPTD01_3254
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hbp03016
]
HPTD01_3254
Enzymes [BR:
hbp01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
HPTD01_3254
Amino acid related enzymes [BR:
hbp01007
]
Aminoacyl-tRNA synthetase
Class II (U)
HPTD01_3254
Transfer RNA biogenesis [BR:
hbp03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
HPTD01_3254
Prokaryotic type
HPTD01_3254
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
FDX-ACB
tRNA_bind
B5
Motif
Other DBs
NCBI-ProteinID:
CAH1044776
UniProt:
A0AA35E4A4
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Position
HaloTd01MainCirc:complement(3488703..3491084)
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AA seq
793 aa
AA seq
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MKFSEQWLRDWVAPQLDTQAIADQITMAGLEVDAIEAVASSFSGVVIAEVLTKERHPDAD
KLNVCTVNDGTGEPVQVVCGAPNVDVGQKIPFAQVGGVLPGDFKIKKAKLRGVESRGMIC
SASELGLEEDTSPGILVLPASAPVGISFREYMQLDDMTIEVDLTPNRGDCLSIKGLAREV
GVLNRLPVSGPDIAAVDASIDDTFSVRIEAPEQCPRYMGRIIKGVDVSVETPLWMVERLR
RSGVRSIDPVVDVTNYVMLELGQPLHAFDRDNLHGGITVRLARNEERLTLLDGQEVALRP
ETLVIADDKGPLAMAGVMGGENSGVNEKTDTIFLESAYFTPLAIAGQARSYGLHTDASHR
FERGVDPALASVAVERASQLLMDICGGQAGPVTESSSDEHLPVPRSIVLREARLESALSK
RLPVEDVTDILQRLGLAVDKQVDGWSVTAPSWRFDVAIEEDLIEEIARVHGYNNLPVRRP
AARLALRPANEAVLTQAQLRNQMVARGFQEAITYSFVSPDLQATMLPDAVSPVLANPISS
DLSVMRASLFPGLVRALEHNLNRQQTRVRLFETGLVFNGHLDNLSQIPMMGALACGGREV
EGWNGVKAQVDFYDLKGDLESLLALGGALDAWRFEPGEHPSLHPGQTAKLLHHGKPAGWI
GTLHPQVRAKLGLKVDAVMFEVRLDALSEGVIPAFEPLSRYPEVRRDLAFTVKAETPVQA
LLDCAKAQAGDYLKDIKLFDVYAGKGVADGYKSIALGLTWQHASRTLNDDEINPLVDSIV
SQVRAELDAELRG
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atgaaattttcagaacagtggctgcgtgactgggtggctccgcagcttgatacacaggca
atcgccgatcaaatcaccatggcaggccttgaagtcgatgccattgaggccgttgcgtcc
tcgtttagtggggtagtcattgcagaggtgctgactaaagagaggcaccctgatgctgac
aagctcaacgtatgtactgtcaatgatggtaccggtgagcctgtgcaggttgtttgcggc
gctcccaacgtcgacgttggtcaaaaaattccgtttgctcaggtaggtggggttctgcct
ggcgactttaaaatcaagaaagccaagttgcgtggcgttgagtcccgcggaatgatttgc
tcggcctctgagttaggtctggaggaggacacgtcacctggtattttggtgctgcctgct
tccgcaccggtaggcatcagttttcgggagtacatgcagcttgacgacatgaccattgag
gttgatctcacgccgaaccgtggtgattgtctcagcatcaaagggctggcacgagaagtg
ggtgtgctcaatcgccttccggtgagtgggcccgacattgctgctgttgatgccagcatc
gatgatactttttcagtacgtattgaggcgccggagcaatgcccgcgctacatgggtcgt
attatcaaaggcgttgatgttagcgtcgaaaccccactgtggatggtagagcgcctccgg
cgcagcggtgttcgctctatcgaccccgtagttgatgtcaccaactatgtgatgttagag
ctggggcaaccattgcatgcatttgaccgtgacaatcttcacggcggtatcaccgttcgt
ttggcgcgtaatgaagagcgtttgaccttgttggacgggcaagaagtggcgcttaggccg
gaaacgctggttattgcagatgataagggccctcttgcaatggcaggtgtcatggggggc
gagaattcaggggtgaatgagaaaaccgatacgattttcttggagtctgcctatttcacg
ccgctggctatcgcaggacaggcccgttcttatggcctccatacagatgcatctcatcgt
tttgagcgtggcgttgatccggcgcttgccagtgtggccgttgaacgtgccagtcagctc
ctgatggatatatgtggtggccaggcagggcctgttactgagtcgtctagtgatgagcac
ctgccagtgccacgcagcatcgtgctgcgcgaggcgcgtcttgaaagtgcgctttcgaag
cgtctgccagttgaagacgtaactgatattcttcagcgtttagggcttgcggttgataag
caggtagatggctggtcagtcacagcgcccagctggcgttttgacgtggcgatcgaagaa
gacctcattgaggagattgcgcgcgttcatggctacaacaacctgcctgtccgacgtcct
gcggcgcgtttggcgttacgtccggctaacgaggcggtgttaacgcaagctcaactgcgc
aaccaaatggtagctcgtggttttcaggaggcgataacttacagctttgtttcgcctgat
ctgcaagcgacgatgttgccagatgcagtttcaccagtgctggcgaacccgatttcgtca
gatttgtcggtgatgcgggctagtctgttccccggcttagtgcgtgcgcttgagcacaac
ctcaaccgccagcaaactcgtgtcagactgtttgaaaccggattggtatttaacggccat
ttggacaacctctcgcagatcccaatgatgggggcgctggcgtgcggaggtcgtgaagtt
gagggttggaatggtgttaaagcccaggtcgatttctacgatcttaaaggggatttagaa
agcctgctagcgcttggtggcgcgcttgacgcatggcgctttgagccaggtgagcatcct
tcattacatcctgggcaaacggcgaagctgttgcatcatggtaagcctgctggttggatt
ggcacgttacatcctcaagtgcgagctaagcttggactgaaagttgatgctgttatgttt
gaagttcgtttagatgcgctcagcgagggtgtcattccagcttttgaaccgctgtctcgt
tatcctgaggttcgccgtgacttggcctttactgttaaggcggagacgccggtgcaggcg
ctacttgactgtgcaaaagcgcaagcgggggattacttaaaagacattaagctgtttgat
gtctatgctggtaagggcgtcgccgatggttacaagagtattgcgttgggcttgacgtgg
cagcatgcatcgcgcacgctaaatgacgatgaaatcaacccgttggtagattccatcgta
tcgcaagtgcgagctgaattagacgctgagctacgtggatag
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